RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 AEBP2Q6ZN18 517 aaPredicted RBP36.85■■■■□ 3.49
PFDN1-202ENST00000507185 CHIC1Q5VXU3 224 aa35.49■■■■□ 3.27
PFDN1-202ENST00000507185 SENP3Q9H4L4 574 aaPredicted RBP31.41■■■□□ 2.62
PFDN1-202ENST00000507185 PHF23Q9BUL5 403 aaPredicted RBP31.12■■■□□ 2.57
PFDN1-202ENST00000507185 FOXD1Q16676 465 aa29.19■■■□□ 2.26
PFDN1-202ENST00000507185 PLPPR3Q6T4P5 718 aa28.61■■■□□ 2.17
PFDN1-202ENST00000507185 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
PFDN1-202ENST00000507185 ADRA2BP18089 450 aa27.62■■■□□ 2.01
PFDN1-202ENST00000507185 PIAS4Q8N2W9 510 aaPredicted RBP27.43■■□□□ 1.98
PFDN1-202ENST00000507185 MSH5O43196 834 aa27.17■■□□□ 1.94
PFDN1-202ENST00000507185 POTEDQ86YR6 584 aa25.67■■□□□ 1.7
PFDN1-202ENST00000507185 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
PFDN1-202ENST00000507185 MAPK8IP2Q13387 824 aaPredicted RBP25.22■■□□□ 1.63
PFDN1-202ENST00000507185 PPP4R3CPQ6ZMV5 832 aa25.13■■□□□ 1.61
PFDN1-202ENST00000507185 DMRT2Q9Y5R5 561 aa24.96■■□□□ 1.59
PFDN1-202ENST00000507185 CNKSR2Q8WXI2 1034 aa24.55■■□□□ 1.52
PFDN1-202ENST00000507185 NCBP3Q53F19 620 aaKnown RBP24.36■■□□□ 1.49
PFDN1-202ENST00000507185 HOXD11P31277 338 aaPredicted RBP24.22■■□□□ 1.47
PFDN1-202ENST00000507185 RNF216Q9NWF9 866 aaPredicted RBP24.2■■□□□ 1.46
PFDN1-202ENST00000507185 DCAF8L1A6NGE4 600 aa24■■□□□ 1.43
PFDN1-202ENST00000507185 NPM3O75607 178 aaKnown RBP23.94■■□□□ 1.42
PFDN1-202ENST00000507185 KCNA4P22459 653 aa23.91■■□□□ 1.42
PFDN1-202ENST00000507185 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
PFDN1-202ENST00000507185 RNF39Q9H2S5 420 aa23.2■■□□□ 1.3
PFDN1-202ENST00000507185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
PFDN1-202ENST00000507185 CACNB1Q02641 598 aaPredicted RBP23.05■■□□□ 1.28
PFDN1-202ENST00000507185 C1QBPQ07021 282 aaKnown RBP22.92■■□□□ 1.26
PFDN1-202ENST00000507185 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
PFDN1-202ENST00000507185 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
PFDN1-202ENST00000507185 U3KPZ7 1027 aaPredicted RBP22.65■■□□□ 1.22
PFDN1-202ENST00000507185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
PFDN1-202ENST00000507185 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
PFDN1-202ENST00000507185 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
PFDN1-202ENST00000507185 CAPN15O75808 1086 aa22.19■■□□□ 1.14
PFDN1-202ENST00000507185 FOXD4L1Q9NU39 408 aa22.18■■□□□ 1.14
PFDN1-202ENST00000507185 MYCNP04198 464 aaPredicted RBP22.16■■□□□ 1.14
PFDN1-202ENST00000507185 APLP2Q06481 763 aa22.16■■□□□ 1.14
PFDN1-202ENST00000507185 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.13
PFDN1-202ENST00000507185 ZBTB22O15209 634 aa21.96■■□□□ 1.11
PFDN1-202ENST00000507185 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
PFDN1-202ENST00000507185 ZNF219Q9P2Y4 722 aaPredicted RBP21.91■■□□□ 1.1
PFDN1-202ENST00000507185 DSG3P32926 999 aa21.89■■□□□ 1.09
PFDN1-202ENST00000507185 ABCB7O75027 752 aa21.69■■□□□ 1.06
PFDN1-202ENST00000507185 ATF5Q9Y2D1 282 aaPredicted RBP21.57■■□□□ 1.04
PFDN1-202ENST00000507185 ATXN8OSP0DMR3 200 aa21.46■■□□□ 1.03
PFDN1-202ENST00000507185 POLA2Q14181 598 aa21.45■■□□□ 1.02
PFDN1-202ENST00000507185 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
PFDN1-202ENST00000507185 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
PFDN1-202ENST00000507185 ZBTB12Q9Y330 459 aaPredicted RBP21.08■□□□□ 0.97
PFDN1-202ENST00000507185 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
PFDN1-202ENST00000507185 FBLN2P98095 1184 aa20.78■□□□□ 0.92
PFDN1-202ENST00000507185 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
PFDN1-202ENST00000507185 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
PFDN1-202ENST00000507185 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
PFDN1-202ENST00000507185 SPDYE2BA6NHP3 402 aa20.44■□□□□ 0.86
PFDN1-202ENST00000507185 SPDYE6P0CI01 402 aa20.44■□□□□ 0.86
PFDN1-202ENST00000507185 SPDYE2Q495Y8 402 aa20.44■□□□□ 0.86
PFDN1-202ENST00000507185 REM2Q8IYK8 340 aaPredicted RBP20.33■□□□□ 0.85
PFDN1-202ENST00000507185 ZNF692Q9BU19 519 aaPredicted RBP20.3■□□□□ 0.84
PFDN1-202ENST00000507185 CHRDL2Q6WN34 429 aa20.25■□□□□ 0.83
PFDN1-202ENST00000507185 POTEHQ6S545 545 aa20.24■□□□□ 0.83
PFDN1-202ENST00000507185 SSUH2Q9Y2M2 353 aa20.19■□□□□ 0.82
PFDN1-202ENST00000507185 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
PFDN1-202ENST00000507185 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
PFDN1-202ENST00000507185 SPDYE1Q8NFV5 336 aaPredicted RBP19.98■□□□□ 0.79
PFDN1-202ENST00000507185 CLEC11AQ9Y240 323 aa19.94■□□□□ 0.78
PFDN1-202ENST00000507185 SPDYE4A6NLX3 237 aa19.93■□□□□ 0.78
PFDN1-202ENST00000507185 PIP4P2Q8N4L2 257 aa19.86■□□□□ 0.77
PFDN1-202ENST00000507185 FXR2P51116 673 aaKnown RBP eCLIP19.81■□□□□ 0.76
PFDN1-202ENST00000507185 PRR29P0C7W0 189 aa19.68■□□□□ 0.74
PFDN1-202ENST00000507185 PRKAR2AP13861 404 aaKnown RBP19.6■□□□□ 0.73
PFDN1-202ENST00000507185 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
PFDN1-202ENST00000507185 CHADLQ6NUI6 762 aa19.47■□□□□ 0.71
PFDN1-202ENST00000507185 PROM2Q8N271 834 aa19.46■□□□□ 0.71
PFDN1-202ENST00000507185 FKBP8Q14318 412 aa19.43■□□□□ 0.7
PFDN1-202ENST00000507185 HAX1O00165 279 aa19.42■□□□□ 0.7
PFDN1-202ENST00000507185 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
PFDN1-202ENST00000507185 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
PFDN1-202ENST00000507185 SP7Q8TDD2 431 aaPredicted RBP19.19■□□□□ 0.66
PFDN1-202ENST00000507185 C19orf67A6NJJ6 358 aa19.16■□□□□ 0.66
PFDN1-202ENST00000507185 EVX2Q03828 476 aa19.14■□□□□ 0.65
PFDN1-202ENST00000507185 CD44P16070 742 aaKnown RBP19.01■□□□□ 0.63
PFDN1-202ENST00000507185 MIER1Q8N108 512 aa18.99■□□□□ 0.63
PFDN1-202ENST00000507185 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
PFDN1-202ENST00000507185 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
PFDN1-202ENST00000507185 MNX1P50219 401 aaPredicted RBP18.96■□□□□ 0.63
PFDN1-202ENST00000507185 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
PFDN1-202ENST00000507185 PLCD3Q8N3E9 789 aa18.91■□□□□ 0.62
PFDN1-202ENST00000507185 ZRANB1Q9UGI0 708 aa18.83■□□□□ 0.6
PFDN1-202ENST00000507185 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
PFDN1-202ENST00000507185 GABBR2O75899 941 aa18.77■□□□□ 0.6
PFDN1-202ENST00000507185 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
PFDN1-202ENST00000507185 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
PFDN1-202ENST00000507185 CLCN6P51797 869 aa18.68■□□□□ 0.58
PFDN1-202ENST00000507185 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
PFDN1-202ENST00000507185 TSPYL2Q9H2G4 693 aaPredicted RBP18.64■□□□□ 0.57
PFDN1-202ENST00000507185 PHF12Q96QT6 1004 aa18.58■□□□□ 0.56
PFDN1-202ENST00000507185 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
PFDN1-202ENST00000507185 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
PFDN1-202ENST00000507185 NUBP1P53384 320 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms