RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
RIF1-210ENST00000484077 AGERQ15109 404 aa10.72□□□□□ -0.69
RIF1-210ENST00000484077 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
RIF1-210ENST00000484077 FOXJ1Q92949 421 aa10.72□□□□□ -0.69
RIF1-210ENST00000484077 ZNF608Q9ULD9 1512 aaPredicted RBP10.72□□□□□ -0.69
RIF1-210ENST00000484077 PBRM1Q86U86 1689 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 CDK15Q96Q40 435 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 C1QTNF2Q9BXJ5 285 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 AAASQ9NRG9 546 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 WASF2Q9Y6W5 498 aa10.71□□□□□ -0.69
RIF1-210ENST00000484077 AXIN1O15169 862 aa10.7□□□□□ -0.7
RIF1-210ENST00000484077 NR6A1Q15406 480 aa10.7□□□□□ -0.7
RIF1-210ENST00000484077 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
RIF1-210ENST00000484077 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
RIF1-210ENST00000484077 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
RIF1-210ENST00000484077 CHD1O14646 1710 aa10.68□□□□□ -0.7
RIF1-210ENST00000484077 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
RIF1-210ENST00000484077 MAP4K5Q9Y4K4 846 aa10.68□□□□□ -0.7
RIF1-210ENST00000484077 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
RIF1-210ENST00000484077 APBB1O00213 710 aa10.67□□□□□ -0.7
RIF1-210ENST00000484077 TLL2Q9Y6L7 1015 aa10.67□□□□□ -0.7
RIF1-210ENST00000484077 ADH1CP00326 375 aa10.66□□□□□ -0.7
RIF1-210ENST00000484077 PTK2Q05397 1052 aa10.66□□□□□ -0.7
RIF1-210ENST00000484077 HPS1Q92902 700 aa10.66□□□□□ -0.7
RIF1-210ENST00000484077 HMX1Q9NP08 348 aaPredicted RBP10.66□□□□□ -0.7
RIF1-210ENST00000484077 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
RIF1-210ENST00000484077 NR5A1Q13285 461 aa10.65□□□□□ -0.7
RIF1-210ENST00000484077 ARHGAP9Q9BRR9 750 aa10.65□□□□□ -0.7
RIF1-210ENST00000484077 SOGA1O94964 1423 aa10.65□□□□□ -0.7
RIF1-210ENST00000484077 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
RIF1-210ENST00000484077 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
RIF1-210ENST00000484077 TRIM34Q9BYJ4 488 aa10.63□□□□□ -0.71
RIF1-210ENST00000484077 MAGEB6P1A0A0J9YX57 407 aa10.62□□□□□ -0.71
RIF1-210ENST00000484077 NNTQ13423 1086 aa10.62□□□□□ -0.71
RIF1-210ENST00000484077 ERFEQ4G0M1 354 aa10.62□□□□□ -0.71
RIF1-210ENST00000484077 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
RIF1-210ENST00000484077 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.71
RIF1-210ENST00000484077 ZNF787Q6DD87 383 aa10.61□□□□□ -0.71
RIF1-210ENST00000484077 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
RIF1-210ENST00000484077 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
RIF1-210ENST00000484077 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
RIF1-210ENST00000484077 ARID5BQ14865 1188 aa10.6□□□□□ -0.71
RIF1-210ENST00000484077 CAPN5O15484 640 aaPredicted RBP10.59□□□□□ -0.71
RIF1-210ENST00000484077 GRM5P41594 1212 aa10.59□□□□□ -0.71
RIF1-210ENST00000484077 VASH1Q7L8A9 365 aaPredicted RBP10.59□□□□□ -0.71
RIF1-210ENST00000484077 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
RIF1-210ENST00000484077 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
RIF1-210ENST00000484077 ADAMTS12P58397 1594 aa10.59□□□□□ -0.71
RIF1-210ENST00000484077 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
RIF1-210ENST00000484077 MAGI1Q96QZ7 1491 aaPredicted RBP10.58□□□□□ -0.72
RIF1-210ENST00000484077 SLC10A4Q96EP9 437 aa10.58□□□□□ -0.72
RIF1-210ENST00000484077 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
RIF1-210ENST00000484077 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
RIF1-210ENST00000484077 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
RIF1-210ENST00000484077 NDUFB9Q9Y6M9 179 aa10.57□□□□□ -0.72
RIF1-210ENST00000484077 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
RIF1-210ENST00000484077 ADAM32Q8TC27 787 aa10.56□□□□□ -0.72
RIF1-210ENST00000484077 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
RIF1-210ENST00000484077 OCSTAMPQ9BR26 566 aa10.56□□□□□ -0.72
RIF1-210ENST00000484077 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
RIF1-210ENST00000484077 PRM3Q9NNZ6 103 aa10.56□□□□□ -0.72
RIF1-210ENST00000484077 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
RIF1-210ENST00000484077 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
RIF1-210ENST00000484077 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
RIF1-210ENST00000484077 TIMP2P16035 220 aa10.54□□□□□ -0.72
RIF1-210ENST00000484077 FSHRP23945 695 aa10.54□□□□□ -0.72
RIF1-210ENST00000484077 WDR4P57081 412 aaKnown RBP10.54□□□□□ -0.72
RIF1-210ENST00000484077 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
RIF1-210ENST00000484077 DACH1Q9UI36 760 aa10.54□□□□□ -0.72
RIF1-210ENST00000484077 EMILIN1Q9Y6C2 1016 aa10.54□□□□□ -0.72
RIF1-210ENST00000484077 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
RIF1-210ENST00000484077 CCDC116Q8IYX3 515 aa10.53□□□□□ -0.72
RIF1-210ENST00000484077 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
RIF1-210ENST00000484077 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
RIF1-210ENST00000484077 NR3C2P08235 984 aa10.52□□□□□ -0.73
RIF1-210ENST00000484077 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
RIF1-210ENST00000484077 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
RIF1-210ENST00000484077 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
RIF1-210ENST00000484077 GMPR2Q9P2T1 348 aaKnown RBP10.52□□□□□ -0.73
RIF1-210ENST00000484077 ZNF330Q9Y3S2 320 aaPredicted RBP10.52□□□□□ -0.73
RIF1-210ENST00000484077 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
RIF1-210ENST00000484077 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
RIF1-210ENST00000484077 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
RIF1-210ENST00000484077 CUL7Q14999 1698 aa10.5□□□□□ -0.73
RIF1-210ENST00000484077 ZIC2O95409 532 aaPredicted RBP10.5□□□□□ -0.73
RIF1-210ENST00000484077 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
RIF1-210ENST00000484077 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
RIF1-210ENST00000484077 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
RIF1-210ENST00000484077 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
RIF1-210ENST00000484077 RIMBP3BA6NNM3 1639 aa10.49□□□□□ -0.73
RIF1-210ENST00000484077 RIMBP3Q9UFD9 1639 aa10.49□□□□□ -0.73
RIF1-210ENST00000484077 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
RIF1-210ENST00000484077 NR1H3Q13133 447 aa10.49□□□□□ -0.73
RIF1-210ENST00000484077 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
RIF1-210ENST00000484077 POTECB2RU33 542 aa10.48□□□□□ -0.73
RIF1-210ENST00000484077 ITPKCQ96DU7 683 aa10.48□□□□□ -0.73
RIF1-210ENST00000484077 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
RIF1-210ENST00000484077 SCARF1Q14162 830 aa10.47□□□□□ -0.73
RIF1-210ENST00000484077 INTS6LQ5JSJ4 861 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms