RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CAMK4Q16566 473 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 LRRFIP1Q32MZ4 808 aaKnown RBP12.04□□□□□ -0.48
COL12A1-207ENST00000483888 PKD2Q13563 968 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 MAP2K2P36507 400 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
COL12A1-207ENST00000483888 ME1P48163 572 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 SPECC1LQ69YQ0 1117 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-207ENST00000483888 SMTNL1A8MU46 457 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 TRDNQ13061 729 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 OTUD6BQ8N6M0 293 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 ATP2C2O75185 946 aa12.04□□□□□ -0.48
COL12A1-207ENST00000483888 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
COL12A1-207ENST00000483888 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-207ENST00000483888 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
COL12A1-207ENST00000483888 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
COL12A1-207ENST00000483888 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
COL12A1-207ENST00000483888 CFAP100Q494V2 611 aa12.03□□□□□ -0.48
COL12A1-207ENST00000483888 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
COL12A1-207ENST00000483888 NEMFO60524 1076 aa12.03□□□□□ -0.48
COL12A1-207ENST00000483888 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
COL12A1-207ENST00000483888 STK38Q15208 465 aa12.02□□□□□ -0.48
COL12A1-207ENST00000483888 ZNF397Q8NF99 534 aaPredicted RBP12.02□□□□□ -0.48
COL12A1-207ENST00000483888 EBAG9O00559 213 aa12.02□□□□□ -0.48
COL12A1-207ENST00000483888 TXLNAP40222 546 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 ZNF830Q96NB3 372 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-207ENST00000483888 MCM6Q14566 821 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 FAM114A1Q8IWE2 563 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 HYPKQ9NX55 129 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-207ENST00000483888 KIF5BP33176 963 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 RPAINQ86UA6 219 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 PPM1EQ8WY54 764 aa12.02□□□□□ -0.49
COL12A1-207ENST00000483888 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
COL12A1-207ENST00000483888 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
COL12A1-207ENST00000483888 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL12A1-207ENST00000483888 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 VPS18Q9P253 973 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 USP47Q96K76 1375 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 CCDC171Q6TFL3 1326 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 ZSCAN23Q3MJ62 389 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
COL12A1-207ENST00000483888 RNF168Q8IYW5 571 aaPredicted RBP12.01□□□□□ -0.49
COL12A1-207ENST00000483888 CFAP57Q96MR6 1250 aa12□□□□□ -0.49
COL12A1-207ENST00000483888 RB1CC1Q8TDY2 1594 aa12□□□□□ -0.49
COL12A1-207ENST00000483888 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
COL12A1-207ENST00000483888 AP1ARQ63HQ0 302 aa12□□□□□ -0.49
COL12A1-207ENST00000483888 FMNL3Q8IVF7 1028 aa12□□□□□ -0.49
COL12A1-207ENST00000483888 CNTROBQ8N137 903 aa12□□□□□ -0.49
COL12A1-207ENST00000483888 ERC2O15083 957 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 CCDC6Q16204 474 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 GCOM1H8Y6P7 765 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-207ENST00000483888 MYZAPP0CAP1 466 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-207ENST00000483888 TCHPQ9BT92 498 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 KIF4AO95239 1232 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 CCDC121Q6ZUS5 278 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 GTF3C6Q969F1 213 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 GSDMDP57764 484 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 BRMS1Q9HCU9 246 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 ZNF330Q9Y3S2 320 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-207ENST00000483888 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 ERICH2A1L162 156 aa11.99□□□□□ -0.49
COL12A1-207ENST00000483888 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
COL12A1-207ENST00000483888 V9GYY5 206 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-207ENST00000483888 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 HSF2BPO75031 334 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 IMMTQ16891 758 aaKnown RBP11.98□□□□□ -0.49
COL12A1-207ENST00000483888 ANKS4BQ8N8V4 417 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL12A1-207ENST00000483888 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 MIPOL1Q8TD10 442 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 WRNQ14191 1432 aaPredicted RBP eCLIP11.98□□□□□ -0.49
COL12A1-207ENST00000483888 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 CCDC114Q96M63 670 aa11.98□□□□□ -0.49
COL12A1-207ENST00000483888 KIF3BO15066 747 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 SSFA2P28290 1259 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 DMTNQ08495 405 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 SYCP1Q15431 976 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 KDM4AO75164 1064 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 TOP1P11387 765 aaKnown RBP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 TAF4BQ92750 862 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms