RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
CCDC78-212ENST00000482152 RGS12O14924 1447 aa22.47■■□□□ 1.19
CCDC78-212ENST00000482152 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
CCDC78-212ENST00000482152 COL5A2P05997 1499 aaPredicted RBP22.45■■□□□ 1.18
CCDC78-212ENST00000482152 GLI3P10071 1580 aa22.45■■□□□ 1.18
CCDC78-212ENST00000482152 LARP1Q6PKG0 1096 aaKnown RBP22.44■■□□□ 1.18
CCDC78-212ENST00000482152 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
CCDC78-212ENST00000482152 CCDC7Q96M83 1385 aa22.43■■□□□ 1.18
CCDC78-212ENST00000482152 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
CCDC78-212ENST00000482152 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
CCDC78-212ENST00000482152 IP6K1Q92551 441 aa22.43■■□□□ 1.18
CCDC78-212ENST00000482152 KNSTRNQ9Y448 316 aa22.43■■□□□ 1.18
CCDC78-212ENST00000482152 CRB1P82279 1406 aa22.42■■□□□ 1.18
CCDC78-212ENST00000482152 FAM98CQ17RN3 349 aaKnown RBP22.42■■□□□ 1.18
CCDC78-212ENST00000482152 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
CCDC78-212ENST00000482152 COL18A1P39060 1754 aa22.42■■□□□ 1.18
CCDC78-212ENST00000482152 NSD2O96028 1365 aa22.41■■□□□ 1.18
CCDC78-212ENST00000482152 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
CCDC78-212ENST00000482152 WASHC2AQ641Q2 1341 aa22.4■■□□□ 1.18
CCDC78-212ENST00000482152 AMPHP49418 695 aa22.4■■□□□ 1.18
CCDC78-212ENST00000482152 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
CCDC78-212ENST00000482152 KIF24Q5T7B8 1368 aa22.39■■□□□ 1.18
CCDC78-212ENST00000482152 MAP3K19Q56UN5 1328 aa22.39■■□□□ 1.18
CCDC78-212ENST00000482152 CSB-PGBD3P0DP91 1061 aa22.39■■□□□ 1.17
CCDC78-212ENST00000482152 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
CCDC78-212ENST00000482152 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
CCDC78-212ENST00000482152 KIF20BQ96Q89 1820 aa22.38■■□□□ 1.17
CCDC78-212ENST00000482152 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
CCDC78-212ENST00000482152 A0A0G2JS52 829 aa22.37■■□□□ 1.17
CCDC78-212ENST00000482152 MYT1Q01538 1121 aa22.37■■□□□ 1.17
CCDC78-212ENST00000482152 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
CCDC78-212ENST00000482152 ERBB3P21860 1342 aa22.36■■□□□ 1.17
CCDC78-212ENST00000482152 HOXC9P31274 260 aa22.36■■□□□ 1.17
CCDC78-212ENST00000482152 KRT27Q7Z3Y8 459 aa22.35■■□□□ 1.17
CCDC78-212ENST00000482152 ANKRD24Q8TF21 1146 aa22.35■■□□□ 1.17
CCDC78-212ENST00000482152 PER1O15534 1290 aaPredicted RBP22.34■■□□□ 1.17
CCDC78-212ENST00000482152 RRS1Q15050 365 aaKnown RBP22.34■■□□□ 1.17
CCDC78-212ENST00000482152 LTN1O94822 1766 aa22.33■■□□□ 1.17
CCDC78-212ENST00000482152 FBLN1P23142 703 aa22.33■■□□□ 1.17
CCDC78-212ENST00000482152 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
CCDC78-212ENST00000482152 CCDC125Q86Z20 511 aa22.32■■□□□ 1.16
CCDC78-212ENST00000482152 FLT4P35916 1363 aa22.31■■□□□ 1.16
CCDC78-212ENST00000482152 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
CCDC78-212ENST00000482152 UPF1Q92900 1129 aaKnown RBP eCLIP22.31■■□□□ 1.16
CCDC78-212ENST00000482152 NLRP2Q9NX02 1062 aa22.31■■□□□ 1.16
CCDC78-212ENST00000482152 THSD7AQ9UPZ6 1657 aa22.3■■□□□ 1.16
CCDC78-212ENST00000482152 INSRP06213 1382 aa22.29■■□□□ 1.16
CCDC78-212ENST00000482152 NPC1L1Q9UHC9 1359 aa22.29■■□□□ 1.16
CCDC78-212ENST00000482152 PDE3BQ13370 1112 aa22.29■■□□□ 1.16
CCDC78-212ENST00000482152 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
CCDC78-212ENST00000482152 RGPD5Q99666 1765 aa22.27■■□□□ 1.16
CCDC78-212ENST00000482152 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
CCDC78-212ENST00000482152 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
CCDC78-212ENST00000482152 EMILIN1Q9Y6C2 1016 aa22.26■■□□□ 1.15
CCDC78-212ENST00000482152 DDB1Q16531 1140 aa22.25■■□□□ 1.15
CCDC78-212ENST00000482152 HSP90AB2PQ58FF8 381 aa22.25■■□□□ 1.15
CCDC78-212ENST00000482152 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
CCDC78-212ENST00000482152 EXOC5O00471 708 aa22.24■■□□□ 1.15
CCDC78-212ENST00000482152 PPM1GO15355 546 aaPredicted RBP22.24■■□□□ 1.15
CCDC78-212ENST00000482152 TNNT2P45379 298 aaPredicted RBP22.24■■□□□ 1.15
CCDC78-212ENST00000482152 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
CCDC78-212ENST00000482152 IL2RBP14784 551 aa22.23■■□□□ 1.15
CCDC78-212ENST00000482152 BRWD3Q6RI45 1802 aa22.22■■□□□ 1.15
CCDC78-212ENST00000482152 FAM208AQ9UK61 1670 aaKnown RBP22.22■■□□□ 1.15
CCDC78-212ENST00000482152 DISP2A7MBM2 1401 aa22.22■■□□□ 1.15
CCDC78-212ENST00000482152 PARP4Q9UKK3 1724 aaKnown RBP22.2■■□□□ 1.14
CCDC78-212ENST00000482152 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
CCDC78-212ENST00000482152 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
CCDC78-212ENST00000482152 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
CCDC78-212ENST00000482152 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
CCDC78-212ENST00000482152 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
CCDC78-212ENST00000482152 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
CCDC78-212ENST00000482152 RAPGEF4Q8WZA2 1011 aa22.14■■□□□ 1.13
CCDC78-212ENST00000482152 BCL9O00512 1426 aa22.14■■□□□ 1.13
CCDC78-212ENST00000482152 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
CCDC78-212ENST00000482152 OVOS2A0A0G2JMS6 1433 aa22.13■■□□□ 1.13
CCDC78-212ENST00000482152 TNS2Q63HR2 1409 aa22.13■■□□□ 1.13
CCDC78-212ENST00000482152 MTHFSP49914 203 aa22.12■■□□□ 1.13
CCDC78-212ENST00000482152 EIF4A2Q14240 407 aaKnown RBP22.12■■□□□ 1.13
CCDC78-212ENST00000482152 MARCH10Q8NA82 808 aaPredicted RBP22.12■■□□□ 1.13
CCDC78-212ENST00000482152 WNK3Q9BYP7 1800 aa22.12■■□□□ 1.13
CCDC78-212ENST00000482152 LRRC37A3O60309 1634 aa22.11■■□□□ 1.13
CCDC78-212ENST00000482152 TATP17735 454 aaPredicted RBP22.11■■□□□ 1.13
CCDC78-212ENST00000482152 EYA1Q99502 592 aa22.11■■□□□ 1.13
CCDC78-212ENST00000482152 ZCRB1Q8TBF4 217 aaKnown RBP22.1■■□□□ 1.13
CCDC78-212ENST00000482152 EP400Q96L91 3159 aa22.1■■□□□ 1.13
CCDC78-212ENST00000482152 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
CCDC78-212ENST00000482152 PLEKHG2Q9H7P9 1386 aa22.09■■□□□ 1.13
CCDC78-212ENST00000482152 BAG6P46379 1132 aa22.08■■□□□ 1.13
CCDC78-212ENST00000482152 TRIM37O94972 964 aa22.07■■□□□ 1.12
CCDC78-212ENST00000482152 USHBP1Q8N6Y0 703 aa22.07■■□□□ 1.12
CCDC78-212ENST00000482152 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
CCDC78-212ENST00000482152 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
CCDC78-212ENST00000482152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC78-212ENST00000482152 IL13P35225 146 aa22.05■■□□□ 1.12
CCDC78-212ENST00000482152 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
CCDC78-212ENST00000482152 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-212ENST00000482152 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
CCDC78-212ENST00000482152 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
CCDC78-212ENST00000482152 RGPD2P0DJD1 1756 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms