RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 CCDC61Q9Y6R9 512 aa11.22□□□□□ -0.61
RBBP4-211ENST00000477563 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.61
RBBP4-211ENST00000477563 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.61
RBBP4-211ENST00000477563 EVA1CP58658 441 aa11.21□□□□□ -0.61
RBBP4-211ENST00000477563 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.61
RBBP4-211ENST00000477563 WNK3Q9BYP7 1800 aa11.21□□□□□ -0.62
RBBP4-211ENST00000477563 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
RBBP4-211ENST00000477563 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
RBBP4-211ENST00000477563 PLSCR1O15162 318 aa11.2□□□□□ -0.62
RBBP4-211ENST00000477563 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
RBBP4-211ENST00000477563 COL18A1P39060 1754 aa11.2□□□□□ -0.62
RBBP4-211ENST00000477563 ABTB2Q8N961 1025 aa11.19□□□□□ -0.62
RBBP4-211ENST00000477563 SPON1Q9HCB6 807 aa11.19□□□□□ -0.62
RBBP4-211ENST00000477563 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
RBBP4-211ENST00000477563 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
RBBP4-211ENST00000477563 SLIT3O75094 1523 aa11.19□□□□□ -0.62
RBBP4-211ENST00000477563 OVOS2A0A0G2JMS6 1433 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 BCL9O00512 1426 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 CRB1P82279 1406 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 KCNQ2O43526 872 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 GCP02774 474 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 YY1P25490 414 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
RBBP4-211ENST00000477563 AKAP12Q02952 1782 aa11.17□□□□□ -0.62
RBBP4-211ENST00000477563 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
RBBP4-211ENST00000477563 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
RBBP4-211ENST00000477563 PPIP5K1Q6PFW1 1433 aa11.15□□□□□ -0.62
RBBP4-211ENST00000477563 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
RBBP4-211ENST00000477563 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
RBBP4-211ENST00000477563 USP6P35125 1406 aa11.14□□□□□ -0.63
RBBP4-211ENST00000477563 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
RBBP4-211ENST00000477563 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RBBP4-211ENST00000477563 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.636e-7■■■□□ 14.8
RBBP4-211ENST00000477563 PROM2Q8N271 834 aa11.13□□□□□ -0.63
RBBP4-211ENST00000477563 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-211ENST00000477563 DDB1Q16531 1140 aa11.12□□□□□ -0.63
RBBP4-211ENST00000477563 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
RBBP4-211ENST00000477563 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
RBBP4-211ENST00000477563 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
RBBP4-211ENST00000477563 CHD4Q14839 1912 aa11.11□□□□□ -0.63
RBBP4-211ENST00000477563 MYOM1P52179 1685 aa11.11□□□□□ -0.63
RBBP4-211ENST00000477563 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
RBBP4-211ENST00000477563 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-211ENST00000477563 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
RBBP4-211ENST00000477563 ABCC6O95255 1503 aa11.1□□□□□ -0.63
RBBP4-211ENST00000477563 TRPM1Q7Z4N2 1603 aa11.1□□□□□ -0.63
RBBP4-211ENST00000477563 PTGER2P43116 358 aa11.1□□□□□ -0.63
RBBP4-211ENST00000477563 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
RBBP4-211ENST00000477563 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
RBBP4-211ENST00000477563 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
RBBP4-211ENST00000477563 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
RBBP4-211ENST00000477563 NLRP6P59044 892 aa11.09□□□□□ -0.63
RBBP4-211ENST00000477563 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
RBBP4-211ENST00000477563 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
RBBP4-211ENST00000477563 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
RBBP4-211ENST00000477563 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
RBBP4-211ENST00000477563 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 SGIP1Q9BQI5 828 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 PDGFDQ9GZP0 370 aaPredicted RBP11.08□□□□□ -0.64
RBBP4-211ENST00000477563 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
RBBP4-211ENST00000477563 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
RBBP4-211ENST00000477563 SLC15A2Q16348 729 aa11.07□□□□□ -0.64
RBBP4-211ENST00000477563 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
RBBP4-211ENST00000477563 NFAT5O94916 1531 aa11.07□□□□□ -0.64
RBBP4-211ENST00000477563 TXNRD1Q16881 649 aa11.06□□□□□ -0.64
RBBP4-211ENST00000477563 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
RBBP4-211ENST00000477563 CCDC7Q96M83 1385 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 TNS2Q63HR2 1409 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 MON2Q7Z3U7 1717 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 TTC21AQ8NDW8 1320 aa11.05□□□□□ -0.64
RBBP4-211ENST00000477563 EXOC5O00471 708 aa11.04□□□□□ -0.64
RBBP4-211ENST00000477563 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
RBBP4-211ENST00000477563 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
RBBP4-211ENST00000477563 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
RBBP4-211ENST00000477563 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
RBBP4-211ENST00000477563 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
RBBP4-211ENST00000477563 BTAF1O14981 1849 aa11.03□□□□□ -0.64
RBBP4-211ENST00000477563 FHDC1Q9C0D6 1143 aaPredicted RBP11.03□□□□□ -0.64
RBBP4-211ENST00000477563 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
RBBP4-211ENST00000477563 CEP350Q5VT06 3117 aa11.02□□□□□ -0.65
RBBP4-211ENST00000477563 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
RBBP4-211ENST00000477563 LTN1O94822 1766 aa11.02□□□□□ -0.65
RBBP4-211ENST00000477563 ERBB3P21860 1342 aa11□□□□□ -0.65
RBBP4-211ENST00000477563 ARXQ96QS3 562 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms