RNA–Protein interactions for RNA: ENST00000461073.5

SKIV2L-202, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 1,157 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-202ENST00000461073 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
SKIV2L-202ENST00000461073 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
SKIV2L-202ENST00000461073 RTL1A6NKG5 1358 aa20.37■□□□□ 0.85
SKIV2L-202ENST00000461073 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
SKIV2L-202ENST00000461073 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
SKIV2L-202ENST00000461073 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
SKIV2L-202ENST00000461073 FLT4P35916 1363 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 HOXC9P31274 260 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 UNC5CLQ8IV45 518 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 EMILIN1Q9Y6C2 1016 aa20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
SKIV2L-202ENST00000461073 ABCC6O95255 1503 aa20.35■□□□□ 0.85
SKIV2L-202ENST00000461073 PLCH1Q4KWH8 1693 aa20.35■□□□□ 0.85
SKIV2L-202ENST00000461073 BLMP54132 1417 aaPredicted RBP20.35■□□□□ 0.85
SKIV2L-202ENST00000461073 NWD2Q9ULI1 1742 aa20.34■□□□□ 0.85
SKIV2L-202ENST00000461073 LTV1Q96GA3 475 aaPredicted RBP20.34■□□□□ 0.85
SKIV2L-202ENST00000461073 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
SKIV2L-202ENST00000461073 MTHFSP49914 203 aa20.33■□□□□ 0.85
SKIV2L-202ENST00000461073 SLIT2O94813 1529 aa20.32■□□□□ 0.84
SKIV2L-202ENST00000461073 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
SKIV2L-202ENST00000461073 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
SKIV2L-202ENST00000461073 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
SKIV2L-202ENST00000461073 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
SKIV2L-202ENST00000461073 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
SKIV2L-202ENST00000461073 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
SKIV2L-202ENST00000461073 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
SKIV2L-202ENST00000461073 INSRP06213 1382 aa20.31■□□□□ 0.84
SKIV2L-202ENST00000461073 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
SKIV2L-202ENST00000461073 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
SKIV2L-202ENST00000461073 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
SKIV2L-202ENST00000461073 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
SKIV2L-202ENST00000461073 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
SKIV2L-202ENST00000461073 NLRP2Q9NX02 1062 aa20.29■□□□□ 0.84
SKIV2L-202ENST00000461073 COL18A1P39060 1754 aa20.29■□□□□ 0.84
SKIV2L-202ENST00000461073 WDR17Q8IZU2 1322 aa20.28■□□□□ 0.84
SKIV2L-202ENST00000461073 VPS72Q15906 364 aa20.28■□□□□ 0.84
SKIV2L-202ENST00000461073 COL5A2P05997 1499 aaPredicted RBP20.28■□□□□ 0.84
SKIV2L-202ENST00000461073 RGPD5Q99666 1765 aa20.28■□□□□ 0.84
SKIV2L-202ENST00000461073 BCL9LQ86UU0 1499 aa20.27■□□□□ 0.84
SKIV2L-202ENST00000461073 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
SKIV2L-202ENST00000461073 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
SKIV2L-202ENST00000461073 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.83
SKIV2L-202ENST00000461073 ERBB3P21860 1342 aa20.27■□□□□ 0.83
SKIV2L-202ENST00000461073 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
SKIV2L-202ENST00000461073 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
SKIV2L-202ENST00000461073 DIAPH1O60610 1272 aaKnown RBP20.25■□□□□ 0.83
SKIV2L-202ENST00000461073 CRB1P82279 1406 aa20.25■□□□□ 0.83
SKIV2L-202ENST00000461073 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 A0A0G2JS52 829 aa20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 RXRBP28702 533 aa20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 MYT1Q01538 1121 aa20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 GJD4Q96KN9 370 aaPredicted RBP20.24■□□□□ 0.83
SKIV2L-202ENST00000461073 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
SKIV2L-202ENST00000461073 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
SKIV2L-202ENST00000461073 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
SKIV2L-202ENST00000461073 FAM208AQ9UK61 1670 aaKnown RBP20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 ATRNO75882 1429 aa20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 EIF4A2Q14240 407 aaKnown RBP20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
SKIV2L-202ENST00000461073 SPATA31A1Q5TZJ5 1347 aa20.21■□□□□ 0.83
SKIV2L-202ENST00000461073 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
SKIV2L-202ENST00000461073 RAPGEF4Q8WZA2 1011 aa20.18■□□□□ 0.82
SKIV2L-202ENST00000461073 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
SKIV2L-202ENST00000461073 IL13P35225 146 aa20.17■□□□□ 0.82
SKIV2L-202ENST00000461073 FAM98CQ17RN3 349 aaKnown RBP20.17■□□□□ 0.82
SKIV2L-202ENST00000461073 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
SKIV2L-202ENST00000461073 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
SKIV2L-202ENST00000461073 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
SKIV2L-202ENST00000461073 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
SKIV2L-202ENST00000461073 EYA1Q99502 592 aa20.16■□□□□ 0.82
SKIV2L-202ENST00000461073 NEFMP07197 916 aa20.15■□□□□ 0.82
SKIV2L-202ENST00000461073 IL2RBP14784 551 aa20.15■□□□□ 0.82
SKIV2L-202ENST00000461073 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
SKIV2L-202ENST00000461073 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
SKIV2L-202ENST00000461073 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.81
SKIV2L-202ENST00000461073 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
SKIV2L-202ENST00000461073 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
SKIV2L-202ENST00000461073 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
SKIV2L-202ENST00000461073 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
SKIV2L-202ENST00000461073 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
SKIV2L-202ENST00000461073 RGPD2P0DJD1 1756 aa20.11■□□□□ 0.81
SKIV2L-202ENST00000461073 EXOC5O00471 708 aa20.11■□□□□ 0.81
SKIV2L-202ENST00000461073 GLI3P10071 1580 aa20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 HMOX1P09601 288 aa20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 DDB1Q16531 1140 aa20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 UPF1Q92900 1129 aaKnown RBP eCLIP20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
SKIV2L-202ENST00000461073 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.81
SKIV2L-202ENST00000461073 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
SKIV2L-202ENST00000461073 FCHSD2O94868 740 aa20.06■□□□□ 0.8
SKIV2L-202ENST00000461073 PLEKHO1Q53GL0 409 aaPredicted RBP20.06■□□□□ 0.8
SKIV2L-202ENST00000461073 PARP4Q9UKK3 1724 aaKnown RBP20.05■□□□□ 0.8
SKIV2L-202ENST00000461073 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms