RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 UPF3BQ9BZI7 483 aaKnown RBP18.49■□□□□ 0.55
CDH23-207ENST00000442677 TXLNBQ8N3L3 684 aa18.49■□□□□ 0.55
CDH23-207ENST00000442677 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
CDH23-207ENST00000442677 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
CDH23-207ENST00000442677 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
CDH23-207ENST00000442677 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
CDH23-207ENST00000442677 SPDYE4A6NLX3 237 aa18.48■□□□□ 0.55
CDH23-207ENST00000442677 MCM4P33991 863 aa18.47■□□□□ 0.55
CDH23-207ENST00000442677 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
CDH23-207ENST00000442677 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDH23-207ENST00000442677 ARHGAP29Q52LW3 1261 aa18.47■□□□□ 0.55
CDH23-207ENST00000442677 ZSCAN30Q86W11 494 aa18.47■□□□□ 0.55
CDH23-207ENST00000442677 PTPN14Q15678 1187 aa18.47■□□□□ 0.55
CDH23-207ENST00000442677 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
CDH23-207ENST00000442677 HIP1O00291 1037 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 GOPCQ9HD26 462 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 TTC39AQ5SRH9 613 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 CEP63Q96MT8 703 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 CALCOCO1Q9P1Z2 691 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
CDH23-207ENST00000442677 CCDC91Q7Z6B0 441 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 TAF4BQ92750 862 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 AAMPQ13685 434 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
CDH23-207ENST00000442677 NUP133Q8WUM0 1156 aa18.45■□□□□ 0.54
CDH23-207ENST00000442677 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
CDH23-207ENST00000442677 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
CDH23-207ENST00000442677 CCDC69A6NI79 296 aa18.45■□□□□ 0.54
CDH23-207ENST00000442677 URI1O94763 535 aaPredicted RBP18.44■□□□□ 0.54
CDH23-207ENST00000442677 CCDC97Q96F63 343 aaPredicted RBP18.44■□□□□ 0.54
CDH23-207ENST00000442677 JAKMIP3Q5VZ66 844 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 CEP57L1Q8IYX8 460 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 SSBP05455 408 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDH23-207ENST00000442677 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 RAI14Q9P0K7 980 aa18.44■□□□□ 0.54
CDH23-207ENST00000442677 UBE4AQ14139 1066 aa18.43■□□□□ 0.54
CDH23-207ENST00000442677 PPP4R3BQ5MIZ7 849 aa18.43■□□□□ 0.54
CDH23-207ENST00000442677 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
CDH23-207ENST00000442677 PSME1Q06323 249 aa18.43■□□□□ 0.54
CDH23-207ENST00000442677 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
CDH23-207ENST00000442677 BCAR3O75815 825 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 SIL1Q9H173 461 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 SMTNL1A8MU46 457 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 DNA2P51530 1060 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
CDH23-207ENST00000442677 TRMT1Q9NXH9 659 aaKnown RBP18.41■□□□□ 0.54
CDH23-207ENST00000442677 GBP3Q9H0R5 595 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 IFFO1Q0D2I5 559 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 MAP3K11Q16584 847 aa18.41■□□□□ 0.54
CDH23-207ENST00000442677 GNAI3P08754 354 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 SRRTQ9BXP5 876 aaKnown RBP18.4■□□□□ 0.54
CDH23-207ENST00000442677 GNAI2P04899 355 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 MATR3P43243 847 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDH23-207ENST00000442677 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
CDH23-207ENST00000442677 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 KIF18AQ8NI77 898 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 PDRG1Q9NUG6 133 aa18.4■□□□□ 0.54
CDH23-207ENST00000442677 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.54
CDH23-207ENST00000442677 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
CDH23-207ENST00000442677 NEBLO76041 1014 aa18.39■□□□□ 0.53
CDH23-207ENST00000442677 ZNF397Q8NF99 534 aaPredicted RBP18.39■□□□□ 0.53
CDH23-207ENST00000442677 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
CDH23-207ENST00000442677 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
CDH23-207ENST00000442677 ZNF526Q8TF50 670 aaPredicted RBP18.38■□□□□ 0.53
CDH23-207ENST00000442677 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
CDH23-207ENST00000442677 KIF5CO60282 957 aa18.38■□□□□ 0.53
CDH23-207ENST00000442677 C16orf45Q96MC5 204 aaPredicted RBP18.37■□□□□ 0.53
CDH23-207ENST00000442677 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
CDH23-207ENST00000442677 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
CDH23-207ENST00000442677 MICALCLQ6ZW33 695 aa18.37■□□□□ 0.53
CDH23-207ENST00000442677 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
CDH23-207ENST00000442677 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
CDH23-207ENST00000442677 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
CDH23-207ENST00000442677 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
CDH23-207ENST00000442677 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
CDH23-207ENST00000442677 SFPQP23246 707 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDH23-207ENST00000442677 LMAN1P49257 510 aa18.36■□□□□ 0.53
CDH23-207ENST00000442677 SPA17Q15506 151 aa18.36■□□□□ 0.53
CDH23-207ENST00000442677 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
CDH23-207ENST00000442677 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 ERC1Q8IUD2 1116 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 LUZP1Q86V48 1076 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 STAMBPO95630 424 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 GTF2A1P52655 376 aaPredicted RBP18.35■□□□□ 0.53
CDH23-207ENST00000442677 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
CDH23-207ENST00000442677 MTHFSP49914 203 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms