RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
CDH23-207ENST00000442677 PELP1Q8IZL8 1130 aaKnown RBP25.55■■□□□ 1.68
CDH23-207ENST00000442677 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
CDH23-207ENST00000442677 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
CDH23-207ENST00000442677 ERICH6Q7L0X2 663 aa24.84■■□□□ 1.57
CDH23-207ENST00000442677 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
CDH23-207ENST00000442677 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
CDH23-207ENST00000442677 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
CDH23-207ENST00000442677 CENPBP07199 599 aaPredicted RBP24.31■■□□□ 1.48
CDH23-207ENST00000442677 APLP2Q06481 763 aa24.27■■□□□ 1.48
CDH23-207ENST00000442677 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
CDH23-207ENST00000442677 MYT1Q01538 1121 aa24.21■■□□□ 1.47
CDH23-207ENST00000442677 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
CDH23-207ENST00000442677 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
CDH23-207ENST00000442677 NEFLP07196 543 aa23.85■■□□□ 1.41
CDH23-207ENST00000442677 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
CDH23-207ENST00000442677 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
CDH23-207ENST00000442677 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
CDH23-207ENST00000442677 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
CDH23-207ENST00000442677 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
CDH23-207ENST00000442677 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
CDH23-207ENST00000442677 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
CDH23-207ENST00000442677 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
CDH23-207ENST00000442677 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
CDH23-207ENST00000442677 RTL5Q5HYW3 569 aaPredicted RBP22.98■■□□□ 1.27
CDH23-207ENST00000442677 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
CDH23-207ENST00000442677 HRCP23327 699 aa22.91■■□□□ 1.26
CDH23-207ENST00000442677 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.26
CDH23-207ENST00000442677 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
CDH23-207ENST00000442677 ITGAEP38570 1179 aa22.72■■□□□ 1.23
CDH23-207ENST00000442677 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
CDH23-207ENST00000442677 BCANQ96GW7 911 aa22.54■■□□□ 1.2
CDH23-207ENST00000442677 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
CDH23-207ENST00000442677 MYT1LQ9UL68 1186 aa22.48■■□□□ 1.19
CDH23-207ENST00000442677 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
CDH23-207ENST00000442677 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
CDH23-207ENST00000442677 GTF3C3Q9Y5Q9 886 aa22.39■■□□□ 1.17
CDH23-207ENST00000442677 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
CDH23-207ENST00000442677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
CDH23-207ENST00000442677 EIF5BO60841 1220 aaKnown RBP22.28■■□□□ 1.16
CDH23-207ENST00000442677 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
CDH23-207ENST00000442677 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
CDH23-207ENST00000442677 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
CDH23-207ENST00000442677 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
CDH23-207ENST00000442677 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
CDH23-207ENST00000442677 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
CDH23-207ENST00000442677 ANP32AP39687 249 aaKnown RBP21.94■■□□□ 1.1
CDH23-207ENST00000442677 ANP32CO43423 234 aa21.91■■□□□ 1.1
CDH23-207ENST00000442677 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
CDH23-207ENST00000442677 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
CDH23-207ENST00000442677 GLIPR1L2Q4G1C9 344 aa21.86■■□□□ 1.09
CDH23-207ENST00000442677 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
CDH23-207ENST00000442677 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
CDH23-207ENST00000442677 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
CDH23-207ENST00000442677 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
CDH23-207ENST00000442677 ANP32BQ92688 251 aaKnown RBP21.77■■□□□ 1.08
CDH23-207ENST00000442677 NBR1Q14596 966 aa21.71■■□□□ 1.07
CDH23-207ENST00000442677 ARXQ96QS3 562 aa21.68■■□□□ 1.06
CDH23-207ENST00000442677 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
CDH23-207ENST00000442677 FKBP8Q14318 412 aa21.61■■□□□ 1.05
CDH23-207ENST00000442677 NEFMP07197 916 aa21.44■■□□□ 1.02
CDH23-207ENST00000442677 UPF2Q9HAU5 1272 aaKnown RBP21.39■■□□□ 1.01
CDH23-207ENST00000442677 SALL2Q9Y467 1007 aaPredicted RBP21.3■■□□□ 1
CDH23-207ENST00000442677 HNRNPUQ00839 825 aaKnown RBP eCLIP21.27■■□□□ 1
CDH23-207ENST00000442677 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
CDH23-207ENST00000442677 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
CDH23-207ENST00000442677 IRX6P78412 446 aaPredicted RBP21.17■□□□□ 0.98
CDH23-207ENST00000442677 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
CDH23-207ENST00000442677 TRIM44Q96DX7 344 aaPredicted RBP21.11■□□□□ 0.97
CDH23-207ENST00000442677 RTN4Q9NQC3 1192 aaKnown RBP21.1■□□□□ 0.97
CDH23-207ENST00000442677 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
CDH23-207ENST00000442677 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
CDH23-207ENST00000442677 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
CDH23-207ENST00000442677 CDK11BP21127 795 aaKnown RBP21.02■□□□□ 0.96
CDH23-207ENST00000442677 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.02■□□□□ 0.95
CDH23-207ENST00000442677 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
CDH23-207ENST00000442677 NAP1L5Q96NT1 182 aaPredicted RBP20.97■□□□□ 0.95
CDH23-207ENST00000442677 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
CDH23-207ENST00000442677 DNTTIP2Q5QJE6 756 aaKnown RBP20.94■□□□□ 0.94
CDH23-207ENST00000442677 TPRNQ4KMQ1 711 aa20.94■□□□□ 0.94
CDH23-207ENST00000442677 AMER1Q5JTC6 1135 aaPredicted RBP20.94■□□□□ 0.94
CDH23-207ENST00000442677 NCLP19338 710 aaKnown RBP20.93■□□□□ 0.94
CDH23-207ENST00000442677 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
CDH23-207ENST00000442677 FBLN2P98095 1184 aa20.92■□□□□ 0.94
CDH23-207ENST00000442677 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
CDH23-207ENST00000442677 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
CDH23-207ENST00000442677 PTMAP06454 111 aaKnown RBP20.9■□□□□ 0.94
CDH23-207ENST00000442677 TONSLQ96HA7 1378 aa20.89■□□□□ 0.94
CDH23-207ENST00000442677 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
CDH23-207ENST00000442677 BECN1Q14457 450 aa20.86■□□□□ 0.93
CDH23-207ENST00000442677 CHGAP10645 457 aaKnown RBP20.83■□□□□ 0.93
CDH23-207ENST00000442677 WDR43Q15061 677 aaKnown RBP eCLIP20.83■□□□□ 0.92
CDH23-207ENST00000442677 MIER1Q8N108 512 aa20.8■□□□□ 0.92
CDH23-207ENST00000442677 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
CDH23-207ENST00000442677 GOLGA6L22H0YM25 854 aa20.78■□□□□ 0.92
CDH23-207ENST00000442677 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
CDH23-207ENST00000442677 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
CDH23-207ENST00000442677 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
CDH23-207ENST00000442677 HIRIP3Q9BW71 556 aaPredicted RBP20.74■□□□□ 0.91
CDH23-207ENST00000442677 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms