RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
APOBEC3C-202ENST00000428892 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
APOBEC3C-202ENST00000428892 COL5A2P05997 1499 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3C-202ENST00000428892 CRB1P82279 1406 aa15.54■□□□□ 0.08
APOBEC3C-202ENST00000428892 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
APOBEC3C-202ENST00000428892 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
APOBEC3C-202ENST00000428892 PEAK1Q9H792 1746 aa15.52■□□□□ 0.08
APOBEC3C-202ENST00000428892 USP19O94966 1318 aa15.52■□□□□ 0.08
APOBEC3C-202ENST00000428892 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
APOBEC3C-202ENST00000428892 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
APOBEC3C-202ENST00000428892 KCNQ2O43526 872 aa15.51■□□□□ 0.07
APOBEC3C-202ENST00000428892 GCP02774 474 aa15.51■□□□□ 0.07
APOBEC3C-202ENST00000428892 NINLQ9Y2I6 1382 aa15.5■□□□□ 0.07
APOBEC3C-202ENST00000428892 DDB1Q16531 1140 aa15.49■□□□□ 0.07
APOBEC3C-202ENST00000428892 TOM1L2Q6ZVM7 507 aa15.49■□□□□ 0.07
APOBEC3C-202ENST00000428892 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
APOBEC3C-202ENST00000428892 BRD4O60885 1362 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3C-202ENST00000428892 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
APOBEC3C-202ENST00000428892 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
APOBEC3C-202ENST00000428892 CENPJQ9HC77 1338 aaPredicted RBP15.48■□□□□ 0.07
APOBEC3C-202ENST00000428892 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
APOBEC3C-202ENST00000428892 NLRP6P59044 892 aa15.48■□□□□ 0.07
APOBEC3C-202ENST00000428892 SLIT3O75094 1523 aa15.48■□□□□ 0.07
APOBEC3C-202ENST00000428892 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
APOBEC3C-202ENST00000428892 USP6P35125 1406 aa15.46■□□□□ 0.07
APOBEC3C-202ENST00000428892 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
APOBEC3C-202ENST00000428892 MYOM1P52179 1685 aa15.46■□□□□ 0.07
APOBEC3C-202ENST00000428892 COL18A1P39060 1754 aa15.46■□□□□ 0.07
APOBEC3C-202ENST00000428892 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
APOBEC3C-202ENST00000428892 KAT6BQ8WYB5 2073 aa15.45■□□□□ 0.06
APOBEC3C-202ENST00000428892 PLSCR1O15162 318 aa15.44■□□□□ 0.06
APOBEC3C-202ENST00000428892 CSB-PGBD3P0DP91 1061 aa15.44■□□□□ 0.06
APOBEC3C-202ENST00000428892 CHD4Q14839 1912 aa15.44■□□□□ 0.06
APOBEC3C-202ENST00000428892 CDCA7Q9BWT1 371 aaPredicted RBP15.43■□□□□ 0.06
APOBEC3C-202ENST00000428892 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
APOBEC3C-202ENST00000428892 CPSF1Q10570 1443 aaKnown RBP15.43■□□□□ 0.06
APOBEC3C-202ENST00000428892 SOX12O15370 315 aa15.42■□□□□ 0.06
APOBEC3C-202ENST00000428892 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
APOBEC3C-202ENST00000428892 WDR17Q8IZU2 1322 aa15.42■□□□□ 0.06
APOBEC3C-202ENST00000428892 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
APOBEC3C-202ENST00000428892 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
APOBEC3C-202ENST00000428892 STK32BQ9NY57 414 aa15.41■□□□□ 0.06
APOBEC3C-202ENST00000428892 ZBTB7AO95365 584 aa15.4■□□□□ 0.06
APOBEC3C-202ENST00000428892 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
APOBEC3C-202ENST00000428892 NHSQ6T4R5 1651 aa15.4■□□□□ 0.06
APOBEC3C-202ENST00000428892 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
APOBEC3C-202ENST00000428892 LTN1O94822 1766 aa15.39■□□□□ 0.05
APOBEC3C-202ENST00000428892 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
APOBEC3C-202ENST00000428892 EXOC5O00471 708 aa15.37■□□□□ 0.05
APOBEC3C-202ENST00000428892 MARCH10Q8NA82 808 aaPredicted RBP15.37■□□□□ 0.05
APOBEC3C-202ENST00000428892 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
APOBEC3C-202ENST00000428892 FKBP8Q14318 412 aa15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 BTAF1O14981 1849 aa15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 CCDC7Q96M83 1385 aa15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
APOBEC3C-202ENST00000428892 BCL9O00512 1426 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 TNS2Q63HR2 1409 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 ABCC6O95255 1503 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 TXNRD1Q16881 649 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 PTF1AQ7RTS3 328 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 CARD10Q9BWT7 1032 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 TTC21AQ8NDW8 1320 aa15.35■□□□□ 0.05
APOBEC3C-202ENST00000428892 SLC15A2Q16348 729 aa15.34■□□□□ 0.05
APOBEC3C-202ENST00000428892 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
APOBEC3C-202ENST00000428892 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
APOBEC3C-202ENST00000428892 PDGFDQ9GZP0 370 aaPredicted RBP15.34■□□□□ 0.05
APOBEC3C-202ENST00000428892 TTC21BQ7Z4L5 1316 aa15.34■□□□□ 0.05
APOBEC3C-202ENST00000428892 KTN1Q86UP2 1357 aaKnown RBP15.33■□□□□ 0.04
APOBEC3C-202ENST00000428892 NFAT5O94916 1531 aa15.33■□□□□ 0.04
APOBEC3C-202ENST00000428892 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3C-202ENST00000428892 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3C-202ENST00000428892 MTFR1LQ9H019 292 aa15.32■□□□□ 0.04
APOBEC3C-202ENST00000428892 PROM2Q8N271 834 aa15.31■□□□□ 0.04
APOBEC3C-202ENST00000428892 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
APOBEC3C-202ENST00000428892 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
APOBEC3C-202ENST00000428892 PTGER2P43116 358 aa15.3■□□□□ 0.04
APOBEC3C-202ENST00000428892 USP54Q70EL1 1684 aa15.3■□□□□ 0.04
APOBEC3C-202ENST00000428892 FAM208AQ9UK61 1670 aaKnown RBP15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 PAPPAQ13219 1627 aa15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 ZNF784Q8NCA9 323 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 SYT17Q9BSW7 474 aa15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 QSER1Q2KHR3 1735 aa15.29■□□□□ 0.04
APOBEC3C-202ENST00000428892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.28■□□□□ 0.04
APOBEC3C-202ENST00000428892 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
APOBEC3C-202ENST00000428892 ARXQ96QS3 562 aa15.27■□□□□ 0.04
APOBEC3C-202ENST00000428892 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
APOBEC3C-202ENST00000428892 IL2RBP14784 551 aa15.26■□□□□ 0.03
APOBEC3C-202ENST00000428892 TESK2Q96S53 571 aa15.26■□□□□ 0.03
APOBEC3C-202ENST00000428892 ERBB3P21860 1342 aa15.25■□□□□ 0.03
APOBEC3C-202ENST00000428892 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
APOBEC3C-202ENST00000428892 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
APOBEC3C-202ENST00000428892 UTRNP46939 3433 aa15.25■□□□□ 0.03
APOBEC3C-202ENST00000428892 USP47Q96K76 1375 aa15.24■□□□□ 0.03
APOBEC3C-202ENST00000428892 GPR162Q16538 588 aa15.24■□□□□ 0.03
APOBEC3C-202ENST00000428892 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
APOBEC3C-202ENST00000428892 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms