RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 NEXMIFQ5QGS0 1516 aa9.24□□□□□ -0.93
PTPN20-208ENST00000395727 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
PTPN20-208ENST00000395727 KIF1BO60333 1816 aa9.23□□□□□ -0.93
PTPN20-208ENST00000395727 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 MED1Q15648 1581 aaPredicted RBP9.22□□□□□ -0.93
PTPN20-208ENST00000395727 NUTM2FA1L443 756 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 PTGDRQ13258 359 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 SLC26A8Q96RN1 970 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
PTPN20-208ENST00000395727 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
PTPN20-208ENST00000395727 COL9A1P20849 921 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 HSPA1LP34931 641 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 PSEN2P49810 448 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 DISP3Q9P2K9 1392 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 DCCP43146 1447 aa9.21□□□□□ -0.94
PTPN20-208ENST00000395727 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
PTPN20-208ENST00000395727 SETD1AO15047 1707 aaKnown RBP9.2□□□□□ -0.94
PTPN20-208ENST00000395727 MSH6P52701 1360 aa9.2□□□□□ -0.94
PTPN20-208ENST00000395727 FCHSD2O94868 740 aa9.19□□□□□ -0.94
PTPN20-208ENST00000395727 PIP4K2BP78356 416 aa9.19□□□□□ -0.94
PTPN20-208ENST00000395727 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-208ENST00000395727 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
PTPN20-208ENST00000395727 PPLO60437 1756 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 RPGRIP1LQ68CZ1 1315 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 PTPRUQ92729 1446 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
PTPN20-208ENST00000395727 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
PTPN20-208ENST00000395727 IFT172Q9UG01 1749 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 PTCH1Q13635 1447 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 HIC1Q14526 733 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
PTPN20-208ENST00000395727 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
PTPN20-208ENST00000395727 AHDC1Q5TGY3 1603 aaPredicted RBP9.16□□□□□ -0.94
PTPN20-208ENST00000395727 CCDC144AA2RUR9 1427 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 SPATA31E1Q6ZUB1 1445 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 GNPATO15228 680 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 ZMYND10O75800 440 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 PRSS12P56730 875 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 LSM11P83369 360 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTPN20-208ENST00000395727 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
PTPN20-208ENST00000395727 SETD5Q9C0A6 1442 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 METP08581 1390 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 COL16A1Q07092 1604 aaPredicted RBP9.14□□□□□ -0.95
PTPN20-208ENST00000395727 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 CDCA7LQ96GN5 454 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 AMOTL2Q9Y2J4 779 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 NALCNQ8IZF0 1738 aa9.14□□□□□ -0.95
PTPN20-208ENST00000395727 TK2O00142 265 aa9.13□□□□□ -0.95
PTPN20-208ENST00000395727 PROX2Q3B8N5 592 aa9.13□□□□□ -0.95
PTPN20-208ENST00000395727 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
PTPN20-208ENST00000395727 SLAIN2Q9P270 581 aa9.13□□□□□ -0.95
PTPN20-208ENST00000395727 PHLPP1O60346 1717 aa9.13□□□□□ -0.95
PTPN20-208ENST00000395727 LAMC1P11047 1609 aa9.13□□□□□ -0.95
PTPN20-208ENST00000395727 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 ONECUT3O60422 494 aaPredicted RBP9.12□□□□□ -0.95
PTPN20-208ENST00000395727 FECHP22830 423 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 NUTM2DQ5VT03 806 aaPredicted RBP9.12□□□□□ -0.95
PTPN20-208ENST00000395727 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 MPHOSPH9Q99550 1183 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 VPS9D1Q9Y2B5 631 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 TECPR2O15040 1411 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 MST1RQ04912 1400 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
PTPN20-208ENST00000395727 KNDC1Q76NI1 1749 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 MYOM2P54296 1465 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 NRXN1Q9ULB1 1477 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 SOCS7O14512 581 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 PIK3C2GO75747 1445 aa9.11□□□□□ -0.95
PTPN20-208ENST00000395727 HRCP23327 699 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 CDC42BPGQ6DT37 1551 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 RAB3GAP2Q9H2M9 1393 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 JCADQ9P266 1359 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 ASXL1Q8IXJ9 1541 aa9.1□□□□□ -0.95
PTPN20-208ENST00000395727 ATF3P18847 181 aa9.09□□□□□ -0.95
PTPN20-208ENST00000395727 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
PTPN20-208ENST00000395727 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
PTPN20-208ENST00000395727 MAP2K5Q13163 448 aa9.08□□□□□ -0.96
PTPN20-208ENST00000395727 RABGEF1Q9UJ41 708 aa9.08□□□□□ -0.96
PTPN20-208ENST00000395727 BHMG1C9JSJ3 638 aaPredicted RBP9.07□□□□□ -0.96
PTPN20-208ENST00000395727 HRO43593 1189 aa9.07□□□□□ -0.96
PTPN20-208ENST00000395727 ANKRD13DQ6ZTN6 518 aa9.07□□□□□ -0.96
PTPN20-208ENST00000395727 BRINP3Q76B58 766 aa9.07□□□□□ -0.96
PTPN20-208ENST00000395727 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
PTPN20-208ENST00000395727 KIAA1468Q9P260 1216 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms