RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RFC5P40937 340 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 USP5P45974 858 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 RNF25Q96BH1 459 aaPredicted RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 ANAPC16Q96DE5 110 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 PLS1Q14651 629 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 BTN2A1Q7KYR7 527 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 UBXN4Q92575 508 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 L3MBTL3Q96JM7 780 aaPredicted RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 ZC3H6P61129 1189 aaKnown RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFC1-201ENST00000349703 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 HSPA5P11021 654 aaKnown RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 BIRC2Q13490 618 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 MCM6Q14566 821 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 IRAK4Q9NWZ3 460 aa7.33□□□□□ -1.24
RFC1-201ENST00000349703 NOVA2Q9UNW9 492 aaKnown RBP7.33□□□□□ -1.24
RFC1-201ENST00000349703 PKNOX2Q96KN3 472 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 TBC1D2Q9BYX2 928 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 SNRKQ9NRH2 765 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 AGRPO00253 132 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 CHGBP05060 677 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 FAM43AQ8N2R8 423 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 CNTLNQ9NXG0 1405 aa7.32□□□□□ -1.24
RFC1-201ENST00000349703 WDR97A6NE52 1622 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 HSP90AB1P08238 724 aaKnown RBP7.31□□□□□ -1.24
RFC1-201ENST00000349703 ZNF354CQ86Y25 554 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 WDR48Q8TAF3 677 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 GGT7Q9UJ14 662 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 IFIT2P09913 472 aaKnown RBP7.31□□□□□ -1.24
RFC1-201ENST00000349703 USP17L8P0C7I0 530 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 NAA30Q147X3 362 aaPredicted RBP7.31□□□□□ -1.24
RFC1-201ENST00000349703 SIRT1Q96EB6 747 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 CBX8Q9HC52 389 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 MTUS2Q5JR59 1369 aa7.31□□□□□ -1.24
RFC1-201ENST00000349703 CDC6Q99741 560 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 SIX5Q8N196 739 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 FERD3LQ96RJ6 166 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 ZBTB21Q9ULJ3 1066 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 BPNT1O95861 308 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 ATF3P18847 181 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
RFC1-201ENST00000349703 C11orf95C9JLR9 678 aaPredicted RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 SH3D19Q5HYK7 790 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 DHX38Q92620 1227 aaKnown RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 STRN4Q9NRL3 753 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 ARID5AQ03989 594 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 SMG6Q86US8 1419 aaKnown RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 PNNQ9H307 717 aaKnown RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 PRKAG2Q9UGJ0 569 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 ARAP1Q96P48 1450 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 ANKRD33BA6NCL7 494 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 DNM1Q05193 864 aaKnown RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 RNF34Q969K3 372 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 SSU72Q9NP77 194 aaKnown RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 NBPF26B4DH59 902 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
RFC1-201ENST00000349703 PRKRIP1Q9H875 184 aaPredicted RBP7.29□□□□□ -1.24
RFC1-201ENST00000349703 FMN1Q68DA7 1419 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 COG6Q9Y2V7 657 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 ERCC3P19447 782 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 MKRN1Q9UHC7 482 aaKnown RBP7.28□□□□□ -1.24
RFC1-201ENST00000349703 DDAH1O94760 285 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 MLECQ14165 292 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 HDGFL2Q7Z4V5 671 aaPredicted RBP7.28□□□□□ -1.24
RFC1-201ENST00000349703 BCCIPQ9P287 314 aaKnown RBP eCLIP7.28□□□□□ -1.24
RFC1-201ENST00000349703 GOLGA6L6A8MZA4 724 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 HSP90AA2PQ14568 343 aaPredicted RBP7.28□□□□□ -1.24
RFC1-201ENST00000349703 SOGA3Q5TF21 947 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
RFC1-201ENST00000349703 MAP3K11Q16584 847 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
RFC1-201ENST00000349703 RAB11FIP3O75154 756 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 PLCB3Q01970 1234 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 RUBCNQ92622 972 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 SLC10A4Q96EP9 437 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 MAP3K1Q13233 1512 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 ROCK2O75116 1388 aaKnown RBP7.27□□□□□ -1.25
RFC1-201ENST00000349703 GPATCH11Q8N954 259 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 SPIRE2Q8WWL2 714 aa7.27□□□□□ -1.25
RFC1-201ENST00000349703 PPP1R37O75864 691 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 NUBP1P53384 320 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 BANK1Q8NDB2 785 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 RCAN3Q9UKA8 241 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 CCDC18Q5T9S5 1454 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 UACAQ9BZF9 1416 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 WASHC2AQ641Q2 1341 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 ZNF76P36508 570 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 EVI5O60447 810 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 SORBS3O60504 671 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 GIGYF1O75420 1035 aaPredicted RBP7.26□□□□□ -1.25
RFC1-201ENST00000349703 MFSD4BQ5TF39 518 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 CCT6BQ92526 530 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 AKAP2Q9Y2D5 859 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 PALM3A6NDB9 673 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms