RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 FLT4P35916 1363 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 SPATA31A6Q5VVP1 1343 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 HDGFL2Q7Z4V5 671 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 RUNDC1Q96C34 613 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 CABP2Q9NPB3 220 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 ADAMTS8Q9UP79 889 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 TNS3Q68CZ2 1445 aa7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 MYT1LQ9UL68 1186 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 KIAA0232Q92628 1395 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 FCHSD2O94868 740 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 BABAM1Q9NWV8 329 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 CEMIPQ8WUJ3 1361 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 HEG1Q9ULI3 1381 aa7.19□□□□□ -1.26
PRPF4B-201ENST00000337659 WAPLQ7Z5K2 1190 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 ZNF428Q96B54 188 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 THSD7AQ9UPZ6 1657 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 RGS12O14924 1447 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 LAMB2P55268 1798 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 JCADQ9P266 1359 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 HSPA1LP34931 641 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 TMC1Q8TDI8 760 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 MSH6P52701 1360 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 ACEP12821 1306 aa7.18□□□□□ -1.26
PRPF4B-201ENST00000337659 CABP1Q9NZU7 370 aa7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 COL5A3P25940 1745 aaPredicted RBP7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 HTATSF1O43719 755 aaKnown RBP7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 ESF1Q9H501 851 aaKnown RBP7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 TRIM35Q9UPQ4 493 aa7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 E9PSI1 815 aa7.17□□□□□ -1.26
PRPF4B-201ENST00000337659 KDM2BQ8NHM5 1336 aa7.16□□□□□ -1.26
PRPF4B-201ENST00000337659 TJP1Q07157 1748 aa7.16□□□□□ -1.26
PRPF4B-201ENST00000337659 PNNQ9H307 717 aaKnown RBP7.16□□□□□ -1.26
PRPF4B-201ENST00000337659 DISP2A7MBM2 1401 aa7.16□□□□□ -1.26
PRPF4B-201ENST00000337659 UBAP1LF5GYI3 381 aa7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 WWC1Q8IX03 1113 aa7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 TNS1Q9HBL0 1735 aaKnown RBP7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 MINK1Q8N4C8 1332 aaPredicted RBP7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 GTF3C3Q9Y5Q9 886 aa7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 ANKRD36CQ5JPF3 1778 aa7.15□□□□□ -1.26
PRPF4B-201ENST00000337659 BCORQ6W2J9 1755 aa7.15□□□□□ -1.27
PRPF4B-201ENST00000337659 MORC1Q86VD1 984 aa7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 MTHFSP49914 203 aa7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 RRP1P56182 461 aaKnown RBP7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 HNRNPUQ00839 825 aaKnown RBP eCLIP7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 CC2D1BQ5T0F9 858 aaKnown RBP7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 POGKQ9P215 609 aa7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 QSER1Q2KHR3 1735 aa7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 ITGB4P16144 1822 aa7.14□□□□□ -1.27
PRPF4B-201ENST00000337659 ARFGEF2Q9Y6D5 1785 aa7.13□□□□□ -1.27
PRPF4B-201ENST00000337659 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
PRPF4B-201ENST00000337659 CASZ1Q86V15 1759 aa7.13□□□□□ -1.27
PRPF4B-201ENST00000337659 CHGAP10645 457 aaKnown RBP7.13□□□□□ -1.27
PRPF4B-201ENST00000337659 TMEM94Q12767 1356 aa7.13□□□□□ -1.27
PRPF4B-201ENST00000337659 KCPQ6ZWJ8 1503 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 CFAP53Q96M91 514 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 PDE3AQ14432 1141 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 ALDH1L2Q3SY69 923 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 ATRNO75882 1429 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 GOLGA2Q08379 1002 aa7.12□□□□□ -1.27
PRPF4B-201ENST00000337659 BCL9O00512 1426 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 LY75O60449 1722 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 SRPK2P78362 688 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 MLECQ14165 292 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 ARHGAP45Q92619 1136 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 PPP4R2Q9NY27 417 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 BRWD3Q6RI45 1802 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 NHSQ6T4R5 1651 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 COL5A2P05997 1499 aaPredicted RBP7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 TMPOP42166 694 aaKnown RBP7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 C19orf44Q9H6X5 657 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 IFT57Q9NWB7 429 aa7.11□□□□□ -1.27
PRPF4B-201ENST00000337659 ARAP2Q8WZ64 1704 aa7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 A0A1B0GUL6 1792 aa7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 SPINK5Q9NQ38 1064 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 DIAPH1O60610 1272 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 NFE2L2Q16236 605 aa7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 PELP1Q8IZL8 1130 aaKnown RBP7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 COL15A1P39059 1388 aa7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 NUTM2DQ5VT03 806 aaPredicted RBP7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 NME9Q86XW9 330 aa7.1□□□□□ -1.27
PRPF4B-201ENST00000337659 ATP10DQ9P241 1426 aa7.09□□□□□ -1.27
PRPF4B-201ENST00000337659 EIF4A2Q14240 407 aaKnown RBP7.09□□□□□ -1.27
PRPF4B-201ENST00000337659 MAP3K19Q56UN5 1328 aa7.09□□□□□ -1.27
PRPF4B-201ENST00000337659 IP6K1Q92551 441 aa7.09□□□□□ -1.27
PRPF4B-201ENST00000337659 ARHGEF25Q86VW2 580 aa7.09□□□□□ -1.28
PRPF4B-201ENST00000337659 COG3Q96JB2 828 aa7.09□□□□□ -1.28
PRPF4B-201ENST00000337659 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.28
PRPF4B-201ENST00000337659 WDR43Q15061 677 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 SPATA31A3Q5VYP0 1347 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 HOXC9P31274 260 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 TCP11L2Q8N4U5 519 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 KCNH5Q8NCM2 988 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.08□□□□□ -1.281e-8■■■■□ 25.8
PRPF4B-201ENST00000337659 PHF8Q9UPP1 1060 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 DDX60Q8IY21 1712 aaKnown RBP7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 ABCC4O15439 1325 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
PRPF4B-201ENST00000337659 STK26Q9P289 416 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms