RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CEP63Q96MT8 703 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 LRRFIP1Q32MZ4 808 aaKnown RBP13.02□□□□□ -0.32
USP31-201ENST00000219689 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.32
USP31-201ENST00000219689 SSFA2P28290 1259 aa13.02□□□□□ -0.32
USP31-201ENST00000219689 NECTIN2Q92692 538 aa13.02□□□□□ -0.32
USP31-201ENST00000219689 PAXBP1Q9Y5B6 917 aa13.02□□□□□ -0.32
USP31-201ENST00000219689 A0A1B0GUL7 405 aa13.02□□□□□ -0.33
USP31-201ENST00000219689 KRT85P78386 507 aa13.02□□□□□ -0.33
USP31-201ENST00000219689 ZSCAN23Q3MJ62 389 aa13.02□□□□□ -0.33
USP31-201ENST00000219689 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
USP31-201ENST00000219689 KIF20AO95235 890 aa13.01□□□□□ -0.33
USP31-201ENST00000219689 MCM3P25205 808 aa13.01□□□□□ -0.33
USP31-201ENST00000219689 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
USP31-201ENST00000219689 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP31-201ENST00000219689 PSMA5P28066 241 aa13.01□□□□□ -0.33
USP31-201ENST00000219689 STK3Q13188 491 aa13.01□□□□□ -0.33
USP31-201ENST00000219689 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
USP31-201ENST00000219689 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
USP31-201ENST00000219689 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP31-201ENST00000219689 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
USP31-201ENST00000219689 STK38Q15208 465 aa13□□□□□ -0.33
USP31-201ENST00000219689 AAMPQ13685 434 aa13□□□□□ -0.33
USP31-201ENST00000219689 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
USP31-201ENST00000219689 KIF5CO60282 957 aa13□□□□□ -0.33
USP31-201ENST00000219689 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
USP31-201ENST00000219689 OGFRQ9NZT2 677 aa13□□□□□ -0.33
USP31-201ENST00000219689 WASHC2AQ641Q2 1341 aa13□□□□□ -0.33
USP31-201ENST00000219689 SPATA32Q96LK8 384 aa13□□□□□ -0.33
USP31-201ENST00000219689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.337e-7■■■□□ 16.4
USP31-201ENST00000219689 TMCO5BA8MYB1 307 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 NEBLO76041 1014 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 LIG1P18858 919 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP31-201ENST00000219689 TRDNQ13061 729 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 MCM6Q14566 821 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
USP31-201ENST00000219689 NUP155O75694 1391 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 SPATA24Q86W54 205 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 ERC2O15083 957 aa12.99□□□□□ -0.33
USP31-201ENST00000219689 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 GOLIM4O00461 696 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 HSPA4P34932 840 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 WDR66Q8TBY9 1149 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 CAPN2P17655 700 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 MYH9P35579 1960 aaKnown RBP12.98□□□□□ -0.33
USP31-201ENST00000219689 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
USP31-201ENST00000219689 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 CROCCQ5TZA2 2017 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 BAZ2BQ9UIF8 2168 aaKnown RBP12.97□□□□□ -0.33
USP31-201ENST00000219689 CCDC175P0C221 793 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
USP31-201ENST00000219689 VPS18Q9P253 973 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 KIF4BQ2VIQ3 1234 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 CCDC160A6NGH7 325 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 BCAR3O75815 825 aa12.97□□□□□ -0.33
USP31-201ENST00000219689 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
USP31-201ENST00000219689 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
USP31-201ENST00000219689 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
USP31-201ENST00000219689 LARP1BQ659C4 914 aaKnown RBP12.96□□□□□ -0.33
USP31-201ENST00000219689 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
USP31-201ENST00000219689 ARFGAP3Q9NP61 516 aa12.96□□□□□ -0.33
USP31-201ENST00000219689 HYPKQ9NX55 129 aa12.96□□□□□ -0.34
USP31-201ENST00000219689 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.343e-7■■□□□ 12.8
USP31-201ENST00000219689 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.34
USP31-201ENST00000219689 WIZO95785 1651 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 MYCBPQ99417 103 aaPredicted RBP12.95□□□□□ -0.34
USP31-201ENST00000219689 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 RIPK4P57078 832 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 SMTNL1A8MU46 457 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
USP31-201ENST00000219689 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
USP31-201ENST00000219689 MAP4K4O95819 1239 aaPredicted RBP12.94□□□□□ -0.34
USP31-201ENST00000219689 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
USP31-201ENST00000219689 OTUD6BQ8N6M0 293 aa12.94□□□□□ -0.34
USP31-201ENST00000219689 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
USP31-201ENST00000219689 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
USP31-201ENST00000219689 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
USP31-201ENST00000219689 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
USP31-201ENST00000219689 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
USP31-201ENST00000219689 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
USP31-201ENST00000219689 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
USP31-201ENST00000219689 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
USP31-201ENST00000219689 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
USP31-201ENST00000219689 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
USP31-201ENST00000219689 ERICH2A1L162 156 aa12.93□□□□□ -0.34
USP31-201ENST00000219689 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
USP31-201ENST00000219689 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
USP31-201ENST00000219689 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
USP31-201ENST00000219689 DAAM2Q86T65 1068 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms