RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Dusp27Q148W8 1138 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Atf3Q60765 181 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Amigo3Q8C2S7 508 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Farp2Q91VS8 1065 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Tet3Q8BG87 1668 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Parp14Q2EMV9 1817 aa18.56■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Neurod2Q62414 383 aa18.56■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Egfem1Q8C088 590 aa18.56■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Pak3Q61036 559 aa18.55■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Cabp4Q8VHC5 271 aa18.55■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Nckap5lQ6GQX2 1323 aa18.54■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Slc4a3P16283 1227 aa18.53■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Trpm3Q5F4S9 1721 aa18.52■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Kcnh5Q920E3 988 aa18.52■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Atxn3Q9CVD2 355 aa18.52■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Swt1Q9DBQ9 907 aa18.52■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Hoxc9P09633 260 aa18.51■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Zmym3Q9JLM4 1370 aa18.51■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Ttc21aQ8C0S4 1314 aa18.5■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Bcl9lQ67FY2 1494 aa18.5■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Abca15E9PWH4 1668 aa18.49■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Brinp3Q499E0 766 aa18.49■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Ankrd50F7BE84 1390 aa18.48■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Iqcf3Q9D498 203 aa18.48■□□□□ 0.55
Ssr1-204ENSMUST00000225319 GnpatP98192 678 aa18.47■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Ipo9Q91YE6 1041 aa18.47■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Stk31Q99MW1 1018 aa18.47■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Rwdd1Q9CQK7 243 aa18.47■□□□□ 0.55
Ssr1-204ENSMUST00000225319 TnrQ8BYI9 1358 aa18.47■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Cyb5rlB1AS42 316 aa18.46■□□□□ 0.55
Ssr1-204ENSMUST00000225319 Gas2l2Q5SSG4 860 aa18.46■□□□□ 0.55
Ssr1-204ENSMUST00000225319 MpripP97434 1024 aa18.45■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Kdm6aO70546 1401 aa18.45■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Eya1P97767 591 aa18.45■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Mcm10Q0VBD2 885 aa18.45■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Fmnl2A2APV2 1086 aa18.44■□□□□ 0.54
Ssr1-204ENSMUST00000225319 TatQ8QZR1 454 aa18.44■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Ccne1Q61457 408 aa18.43■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Ccar1Q8CH18 1146 aaKnown RBP18.43■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Arfgef2A2A5R2 1792 aa18.43■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Atp10bB1AWN4 1474 aa18.43■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Dixdc1Q80Y83 711 aa18.42■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Dzip1Q8BMD2 852 aa18.42■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Rab11fip3Q8CHD8 1047 aa18.42■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Ksr2Q3UVC0 959 aa18.41■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Cabp2Q9JLK4 216 aa18.41■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Ahnak2E9PYB0 1738 aaKnown RBP18.4■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Nid2O88322 1403 aa18.4■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Tmem132eQ6IEE6 982 aa18.4■□□□□ 0.54
Ssr1-204ENSMUST00000225319 Dnajc10Q9DC23 793 aa18.4■□□□□ 0.54
Ssr1-204ENSMUST00000225319 NudcO35685 332 aaKnown RBP18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 CastP51125 788 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Myo5bP21271 1818 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Sos1Q62245 1319 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Kdm2bQ6P1G2 1309 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Gnai1B2RSH2 354 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Gnai3Q9DC51 354 aa18.38■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Marf1Q8BJ34 1730 aaKnown RBP18.37■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Kif24Q6NWW5 1356 aa18.37■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Rbm25B2RY56 838 aaKnown RBP18.37■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Ddx17Q501J6 650 aaKnown RBP18.37■□□□□ 0.53
Ssr1-204ENSMUST00000225319 TmpoQ61033 693 aaKnown RBP18.37■□□□□ 0.53
Ssr1-204ENSMUST00000225319 FocadA2AKG8 1798 aa18.36■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Ccdc171E9Q1U1 1324 aa18.36■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Cdc37l1Q9CZP7 335 aa18.35■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Cadps2Q8BYR5 1297 aa18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 HypkQ9CR41 129 aa18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Nup153E9Q3G8 1462 aaKnown RBP18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Card10P58660 1021 aa18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Gsdma3Q5Y4Y6 464 aa18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Nol11Q8BJW5 723 aaKnown RBP18.34■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Adgrb1Q3UHD1 1582 aa18.33■□□□□ 0.53
Ssr1-204ENSMUST00000225319 Simc1E9Q6E9 1354 aa18.33■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Ttll13A4Q9F6 804 aa18.32■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Trim58Q5NCC9 485 aa18.31■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Znf521Q6KAS7 1311 aa18.31■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Plin1Q8CGN5 517 aa18.31■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Amotl1Q9D4H4 968 aa18.31■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Gm21698A0A087WQP8 267 aa18.29■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Gm21671G3UY31 267 aa18.29■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Col15a1O35206 1367 aa18.28■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Slit1Q80TR4 1531 aa18.28■□□□□ 0.52
Ssr1-204ENSMUST00000225319 AampJ3QN89 436 aa18.28■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Ppp1r37Q8BKR5 712 aa18.28■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Ccdc27Q3V036 639 aa18.27■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Amotl2Q8K371 772 aa18.27■□□□□ 0.52
Ssr1-204ENSMUST00000225319 EspnQ9ET47 871 aa18.27■□□□□ 0.52
Ssr1-204ENSMUST00000225319 Vamp4O70480 141 aa18.27■□□□□ 0.51
Ssr1-204ENSMUST00000225319 TkfcQ8VC30 578 aa18.27■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Rtf1A2AQ19 715 aaKnown RBP18.26■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Ecm2Q5FW85 670 aa18.26■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Cavin2Q63918 418 aaKnown RBP18.26■□□□□ 0.51
Ssr1-204ENSMUST00000225319 ZgpatQ8VDM1 511 aa18.26■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Abcc12Q80WJ6 1366 aa18.25■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Tnks1bp1P58871 1720 aa18.25■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Ccdc60Q8C4J0 545 aa18.25■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Apbb1Q9QXJ1 710 aa18.25■□□□□ 0.51
Ssr1-204ENSMUST00000225319 OptnQ8K3K8 584 aa18.24■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Igsf1Q7TQA1 1317 aa18.24■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Zfp142G5E869 1843 aa18.24■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms