RNA–Protein interactions for RNA: ENSMUST00000211005.1

Nup98-204, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 3,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-204ENSMUST00000211005 Cavin4A2AMM0 362 aa12.4□□□□□ -0.42
Nup98-204ENSMUST00000211005 Eya1P97767 591 aa12.4□□□□□ -0.42
Nup98-204ENSMUST00000211005 Fmnl2A2APV2 1086 aa12.4□□□□□ -0.42
Nup98-204ENSMUST00000211005 Bcl9lQ67FY2 1494 aa12.4□□□□□ -0.42
Nup98-204ENSMUST00000211005 Atp10bB1AWN4 1474 aa12.39□□□□□ -0.43
Nup98-204ENSMUST00000211005 Kank1E9Q238 1360 aa12.39□□□□□ -0.43
Nup98-204ENSMUST00000211005 Slit2Q9R1B9 1521 aa12.39□□□□□ -0.43
Nup98-204ENSMUST00000211005 TnikP83510 1323 aa12.39□□□□□ -0.43
Nup98-204ENSMUST00000211005 Gimap5Q8BWF2 308 aa12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Ncbp3Q8BZR9 615 aaKnown RBP12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Nid2O88322 1403 aa12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Marf1Q8BJ34 1730 aaKnown RBP12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Zmym3Q9JLM4 1370 aa12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Gas2l2Q5SSG4 860 aa12.38□□□□□ -0.43
Nup98-204ENSMUST00000211005 Bcl11bQ99PV8 884 aa12.37□□□□□ -0.43
Nup98-204ENSMUST00000211005 Cabp2Q9JLK4 216 aa12.37□□□□□ -0.43
Nup98-204ENSMUST00000211005 Gm21698A0A087WQP8 267 aa12.37□□□□□ -0.43
Nup98-204ENSMUST00000211005 Gm21671G3UY31 267 aa12.37□□□□□ -0.43
Nup98-204ENSMUST00000211005 Ciz1Q8VEH2 845 aa12.37□□□□□ -0.43
Nup98-204ENSMUST00000211005 Cadps2Q8BYR5 1297 aa12.36□□□□□ -0.43
Nup98-204ENSMUST00000211005 Stk31Q99MW1 1018 aa12.36□□□□□ -0.43
Nup98-204ENSMUST00000211005 Zfp142G5E869 1843 aa12.36□□□□□ -0.43
Nup98-204ENSMUST00000211005 Swt1Q9DBQ9 907 aa12.35□□□□□ -0.43
Nup98-204ENSMUST00000211005 Arfgef2A2A5R2 1792 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Ahnak2E9PYB0 1738 aaKnown RBP12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Nol11Q8BJW5 723 aaKnown RBP12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Kdm6aO70546 1401 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Ttc41Q692V3 1318 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Zfp777B9EKF4 885 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Card10P58660 1021 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Acsbg1Q99PU5 721 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Trpm3Q5F4S9 1721 aa12.34□□□□□ -0.43
Nup98-204ENSMUST00000211005 Plekhh1Q80TI1 1356 aa12.33□□□□□ -0.43
Nup98-204ENSMUST00000211005 Amotl2Q8K371 772 aa12.33□□□□□ -0.44
Nup98-204ENSMUST00000211005 Hspa1lP16627 641 aa12.33□□□□□ -0.44
Nup98-204ENSMUST00000211005 Smim5Q8BT42 78 aa12.33□□□□□ -0.44
Nup98-204ENSMUST00000211005 FocadA2AKG8 1798 aa12.33□□□□□ -0.44
Nup98-204ENSMUST00000211005 Iqcf3Q9D498 203 aa12.32□□□□□ -0.44
Nup98-204ENSMUST00000211005 Txnrd1Q9JMH6 613 aa12.32□□□□□ -0.44
Nup98-204ENSMUST00000211005 TmpoQ61033 693 aaKnown RBP12.31□□□□□ -0.44
Nup98-204ENSMUST00000211005 Col15a1O35206 1367 aa12.31□□□□□ -0.44
Nup98-204ENSMUST00000211005 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.31□□□□□ -0.44
Nup98-204ENSMUST00000211005 Cdhr2E9Q7P9 1308 aa12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 Upf2A2AT37 1269 aaKnown RBP12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 OptnQ8K3K8 584 aa12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 Ksr2Q3UVC0 959 aa12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 Ttc21aQ8C0S4 1314 aa12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 Ankrd50F7BE84 1390 aa12.3□□□□□ -0.44
Nup98-204ENSMUST00000211005 CrklP47941 303 aa12.29□□□□□ -0.44
Nup98-204ENSMUST00000211005 Znf526Q8BI66 675 aa12.29□□□□□ -0.44
Nup98-204ENSMUST00000211005 Ybx3Q9JKB3 361 aaKnown RBP12.29□□□□□ -0.44
Nup98-204ENSMUST00000211005 Ppp1r37Q8BKR5 712 aa12.29□□□□□ -0.44
Nup98-204ENSMUST00000211005 HypkQ9CR41 129 aa12.29□□□□□ -0.44
Nup98-204ENSMUST00000211005 Tom1O88746 492 aa12.28□□□□□ -0.44
Nup98-204ENSMUST00000211005 ZgpatQ8VDM1 511 aa12.28□□□□□ -0.44
Nup98-204ENSMUST00000211005 Snap23O09044 210 aa12.28□□□□□ -0.44
Nup98-204ENSMUST00000211005 Gsdma3Q5Y4Y6 464 aa12.27□□□□□ -0.44
Nup98-204ENSMUST00000211005 Slit1Q80TR4 1531 aa12.27□□□□□ -0.44
Nup98-204ENSMUST00000211005 Qtrt2B8ZXI1 415 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 RgmbQ7TQ33 436 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 TkfcQ8VC30 578 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 Simc1E9Q6E9 1354 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 Rbm25B2RY56 838 aaKnown RBP12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 Rab11fip3Q8CHD8 1047 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 Bcl2l12Q9D3J3 255 aa12.27□□□□□ -0.45
Nup98-204ENSMUST00000211005 HdgfP51859 237 aaKnown RBP12.26□□□□□ -0.45
Nup98-204ENSMUST00000211005 Gm10471E9Q1C7 252 aa12.26□□□□□ -0.45
Nup98-204ENSMUST00000211005 Calr4Q3TQS0 420 aa12.26□□□□□ -0.45
Nup98-204ENSMUST00000211005 Cdc37l1Q9CZP7 335 aa12.26□□□□□ -0.45
Nup98-204ENSMUST00000211005 Trim26Q99PN3 545 aa12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 Ccar1Q8CH18 1146 aaKnown RBP12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 Senp3Q9EP97 568 aaKnown RBP12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 Nup153E9Q3G8 1462 aaKnown RBP12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 Tnks1bp1P58871 1720 aa12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 CastP51125 788 aa12.25□□□□□ -0.45
Nup98-204ENSMUST00000211005 Aplp2Q06335 707 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Klhdc4Q921I2 584 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Amotl1Q9D4H4 968 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Myo5bP21271 1818 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Gnai1B2RSH2 354 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Slx1bQ8BX32 270 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Rwdd1Q9CQK7 243 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Gnai3Q9DC51 354 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Polr3glQ8R0C0 218 aa12.24□□□□□ -0.45
Nup98-204ENSMUST00000211005 Rtf1A2AQ19 715 aaKnown RBP12.23□□□□□ -0.45
Nup98-204ENSMUST00000211005 Ddx54Q8K4L0 874 aaKnown RBP12.23□□□□□ -0.45
Nup98-204ENSMUST00000211005 Apbb1Q9QXJ1 710 aa12.23□□□□□ -0.45
Nup98-204ENSMUST00000211005 Zranb3Q6NZP1 1069 aa12.23□□□□□ -0.45
Nup98-204ENSMUST00000211005 Arhgef1Q61210 920 aaKnown RBP12.22□□□□□ -0.45
Nup98-204ENSMUST00000211005 Pard3Q99NH2 1333 aa12.22□□□□□ -0.45
Nup98-204ENSMUST00000211005 Csrnp3P59055 597 aa12.22□□□□□ -0.45
Nup98-204ENSMUST00000211005 Ggnbp2Q5SV77 696 aa12.22□□□□□ -0.45
Nup98-204ENSMUST00000211005 Prim1P20664 417 aa12.21□□□□□ -0.45
Nup98-204ENSMUST00000211005 U2surpQ6NV83 1029 aaKnown RBP12.21□□□□□ -0.45
Nup98-204ENSMUST00000211005 NudcO35685 332 aaKnown RBP12.21□□□□□ -0.45
Nup98-204ENSMUST00000211005 Usp16Q99LG0 825 aa12.21□□□□□ -0.45
Nup98-204ENSMUST00000211005 Aox2Q5SGK3 1345 aa12.21□□□□□ -0.45
Nup98-204ENSMUST00000211005 Rtl5Q5DTT4 599 aa12.21□□□□□ -0.46
Nup98-204ENSMUST00000211005 ThemisQ8BGW0 636 aa12.21□□□□□ -0.46
Nup98-204ENSMUST00000211005 Lrrc59Q922Q8 307 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms