RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Tmf1B9EKI3 1091 aa29,7■■■□□ 2,35
Fn1-208ENSMUST00000186940 Birc3O08863 600 aa29,7■■■□□ 2,35
Fn1-208ENSMUST00000186940 Zpr1Q62384 459 aa29,68■■■□□ 2,34
Fn1-208ENSMUST00000186940 Ginm1Q91WR6 327 aa29,68■■■□□ 2,34
Fn1-208ENSMUST00000186940 Robo1O89026 1612 aa29,68■■■□□ 2,34
Fn1-208ENSMUST00000186940 Scn7aB1AYL1 1681 aa29,67■■■□□ 2,34
Fn1-208ENSMUST00000186940 Pank3Q8R2W9 370 aa29,66■■■□□ 2,34
Fn1-208ENSMUST00000186940 Slit1Q80TR4 1531 aa29,66■■■□□ 2,34
Fn1-208ENSMUST00000186940 Hoxb7P09024 217 aa29,65■■■□□ 2,34
Fn1-208ENSMUST00000186940 Ddb1Q3U1J4 1140 aaKnown RBP29,65■■■□□ 2,34
Fn1-208ENSMUST00000186940 Akap11E9Q777 1895 aa29,65■■■□□ 2,34
Fn1-208ENSMUST00000186940 PrxO55103 1391 aa29,65■■■□□ 2,34
Fn1-208ENSMUST00000186940 IbtkQ6ZPR6 1352 aaKnown RBP29,65■■■□□ 2,34
Fn1-208ENSMUST00000186940 Hoxc9P09633 260 aa29,64■■■□□ 2,34
Fn1-208ENSMUST00000186940 Map2P20357 1828 aa29,64■■■□□ 2,34
Fn1-208ENSMUST00000186940 Mst1rQ62190 1378 aa29,63■■■□□ 2,33
Fn1-208ENSMUST00000186940 TkfcQ8VC30 578 aa29,63■■■□□ 2,33
Fn1-208ENSMUST00000186940 Zcrb1Q9CZ96 217 aaKnown RBP29,63■■■□□ 2,33
Fn1-208ENSMUST00000186940 Nwd2Q6P5U7 1742 aa29,59■■■□□ 2,33
Fn1-208ENSMUST00000186940 Rad17Q6NXW6 688 aa29,59■■■□□ 2,33
Fn1-208ENSMUST00000186940 Zranb3Q6NZP1 1069 aa29,59■■■□□ 2,33
Fn1-208ENSMUST00000186940 Dcaf11Q91VU6 549 aa29,59■■■□□ 2,33
Fn1-208ENSMUST00000186940 Inpp5dQ9ES52 1191 aa29,59■■■□□ 2,33
Fn1-208ENSMUST00000186940 Exoc5Q3TPX4 708 aa29,58■■■□□ 2,33
Fn1-208ENSMUST00000186940 GakQ99KY4 1305 aa29,58■■■□□ 2,33
Fn1-208ENSMUST00000186940 Sik1Q60670 779 aa29,57■■■□□ 2,32
Fn1-208ENSMUST00000186940 Apba2P98084 750 aa29,56■■■□□ 2,32
Fn1-208ENSMUST00000186940 ClspnQ80YR7 1315 aa29,54■■■□□ 2,32
Fn1-208ENSMUST00000186940 Smg6P61406 1418 aaKnown RBP29,54■■■□□ 2,32
Fn1-208ENSMUST00000186940 GalcP54818 684 aa29,53■■■□□ 2,32
Fn1-208ENSMUST00000186940 Lrit1Q8K099 624 aa29,53■■■□□ 2,32
Fn1-208ENSMUST00000186940 Cc2d1aQ8K1A6 943 aa29,52■■■□□ 2,32
Fn1-208ENSMUST00000186940 Col15a1O35206 1367 aa29,52■■■□□ 2,32
Fn1-208ENSMUST00000186940 Las1lA2BE28 776 aaKnown RBP29,52■■■□□ 2,32
Fn1-208ENSMUST00000186940 Ccne1Q61457 408 aa29,52■■■□□ 2,32
Fn1-208ENSMUST00000186940 Kcnh4A2A5F7 1018 aa29,51■■■□□ 2,31
Fn1-208ENSMUST00000186940 Ppfibp2O35711 882 aa29,51■■■□□ 2,31
Fn1-208ENSMUST00000186940 FocadA2AKG8 1798 aa29,49■■■□□ 2,31
Fn1-208ENSMUST00000186940 Gm10471E9Q1C7 252 aa29,48■■■□□ 2,31
Fn1-208ENSMUST00000186940 Vars2Q3U2A8 1060 aa29,47■■■□□ 2,31
Fn1-208ENSMUST00000186940 Zscan10Q3URR7 782 aa29,46■■■□□ 2,31
Fn1-208ENSMUST00000186940 Gprasp1Q5U4C1 1347 aa29,45■■■□□ 2,3
Fn1-208ENSMUST00000186940 Plekhg5Q66T02 1073 aa29,44■■■□□ 2,3
Fn1-208ENSMUST00000186940 Ptpn23Q6PB44 1692 aa29,43■■■□□ 2,3
Fn1-208ENSMUST00000186940 Elp1Q7TT37 1333 aaKnown RBP29,43■■■□□ 2,3
Fn1-208ENSMUST00000186940 Nsd3Q6P2L6 1439 aa29,41■■■□□ 2,3
Fn1-208ENSMUST00000186940 VirmaA2AIV2 1811 aaKnown RBP29,41■■■□□ 2,3
Fn1-208ENSMUST00000186940 Rab3gap2Q8BMG7 1366 aa29,39■■■□□ 2,3
Fn1-208ENSMUST00000186940 Bsdc1Q80Y55 427 aa29,39■■■□□ 2,29
Fn1-208ENSMUST00000186940 Fam50bQ9WTJ8 334 aa29,39■■■□□ 2,29
Fn1-208ENSMUST00000186940 Snapc4Q8BP86 1333 aa29,37■■■□□ 2,29
Fn1-208ENSMUST00000186940 Aplp2Q06335 707 aa29,36■■■□□ 2,29
Fn1-208ENSMUST00000186940 Ezh2Q61188 746 aaKnown RBP29,36■■■□□ 2,29
Fn1-208ENSMUST00000186940 Arhgap33Q80YF9 1305 aa29,36■■■□□ 2,29
Fn1-208ENSMUST00000186940 Kdm6aO70546 1401 aa29,35■■■□□ 2,29
Fn1-208ENSMUST00000186940 Afg3l2Q8JZQ2 802 aaKnown RBP29,35■■■□□ 2,29
Fn1-208ENSMUST00000186940 Simc1E9Q6E9 1354 aa29,35■■■□□ 2,29
Fn1-208ENSMUST00000186940 Gm21680A0A0G2JGR8 267 aa29,34■■■□□ 2,29
Fn1-208ENSMUST00000186940 Erbb3Q61526 1339 aa29,33■■■□□ 2,29
Fn1-208ENSMUST00000186940 Adgrb1Q3UHD1 1582 aa29,33■■■□□ 2,29
Fn1-208ENSMUST00000186940 4930572O03RikQ8C5Y0 211 aa29,32■■■□□ 2,28
Fn1-208ENSMUST00000186940 Pim2Q62070 370 aa29,31■■■□□ 2,28
Fn1-208ENSMUST00000186940 PnisrA2AJT4 805 aaKnown RBP29,3■■■□□ 2,28
Fn1-208ENSMUST00000186940 Speer4bQ9D9F7 267 aa29,3■■■□□ 2,28
Fn1-208ENSMUST00000186940 Pnpla7A2AJ88 1352 aa29,29■■■□□ 2,28
Fn1-208ENSMUST00000186940 ThemisQ8BGW0 636 aa29,29■■■□□ 2,28
Fn1-208ENSMUST00000186940 Ppp1r37Q8BKR5 712 aa29,29■■■□□ 2,28
Fn1-208ENSMUST00000186940 Eif4a2P10630 407 aa29,28■■■□□ 2,28
Fn1-208ENSMUST00000186940 Eya1P97767 591 aa29,28■■■□□ 2,28
Fn1-208ENSMUST00000186940 Trim28Q62318 834 aa29,27■■■□□ 2,28
Fn1-208ENSMUST00000186940 Cald1E9QA15 768 aaKnown RBP29,26■■■□□ 2,28
Fn1-208ENSMUST00000186940 Parp14Q2EMV9 1817 aa29,25■■■□□ 2,27
Fn1-208ENSMUST00000186940 Ppp1r15aP17564 657 aa29,25■■■□□ 2,27
Fn1-208ENSMUST00000186940 Ahnak2E9PYB0 1738 aaKnown RBP29,24■■■□□ 2,27
Fn1-208ENSMUST00000186940 Q8BT18 775 aa29,22■■■□□ 2,27
Fn1-208ENSMUST00000186940 Ciz1Q8VEH2 845 aa29,21■■■□□ 2,27
Fn1-208ENSMUST00000186940 Sos2Q02384 1333 aa29,2■■■□□ 2,26
Fn1-208ENSMUST00000186940 Arfgef2A2A5R2 1792 aa29,19■■■□□ 2,26
Fn1-208ENSMUST00000186940 Hmgb2P30681 210 aaKnown RBP29,19■■■□□ 2,26
Fn1-208ENSMUST00000186940 Rsph6aQ8CDR2 708 aa29,19■■■□□ 2,26
Fn1-208ENSMUST00000186940 Zfp777B9EKF4 885 aa29,18■■■□□ 2,26
Fn1-208ENSMUST00000186940 Ankrd13dQ6PD24 605 aa29,18■■■□□ 2,26
Fn1-208ENSMUST00000186940 Rps6ka4Q9Z2B9 773 aa29,18■■■□□ 2,26
Fn1-208ENSMUST00000186940 Ccdc85cE9Q6B2 420 aa29,14■■■□□ 2,26
Fn1-208ENSMUST00000186940 MpripP97434 1024 aa29,14■■■□□ 2,26
Fn1-208ENSMUST00000186940 Larp1Q6ZQ58 1072 aaKnown RBP29,13■■■□□ 2,25
Fn1-208ENSMUST00000186940 ApobrQ8VBT6 942 aa29,13■■■□□ 2,25
Fn1-208ENSMUST00000186940 Eif3bQ8JZQ9 803 aaKnown RBP29,12■■■□□ 2,25
Fn1-208ENSMUST00000186940 Kiaa0319lQ8K135 1048 aa29,11■■■□□ 2,25
Fn1-208ENSMUST00000186940 Gpr150Q8BL07 427 aa29,1■■■□□ 2,25
Fn1-208ENSMUST00000186940 Slc12a5Q91V14 1138 aa29,1■■■□□ 2,25
Fn1-208ENSMUST00000186940 Gsdma3Q5Y4Y6 464 aa29,09■■■□□ 2,25
Fn1-208ENSMUST00000186940 Klc3Q91W40 508 aa29,09■■■□□ 2,25
Fn1-208ENSMUST00000186940 PsdQ5DTT2 1024 aa29,08■■■□□ 2,25
Fn1-208ENSMUST00000186940 Gm21663A0A0G2JE01 267 aa29,05■■■□□ 2,24
Fn1-208ENSMUST00000186940 Gm7361D3Z6R1 267 aa29,05■■■□□ 2,24
Fn1-208ENSMUST00000186940 5031410I06RikE9Q4E0 267 aa29,05■■■□□ 2,24
Fn1-208ENSMUST00000186940 Kif23E9Q5G3 953 aa29,05■■■□□ 2,24
Fn1-208ENSMUST00000186940 Gm1979E9QAN3 267 aa29,05■■■□□ 2,24
Fn1-208ENSMUST00000186940 Gm5862K7N5V5 267 aa29,05■■■□□ 2,24
Retrieved 100 of 22,080 RNA–protein pairs in 32,5 ms