RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Snap23O09044 210 aa12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Smc5Q8CG46 1101 aaKnown RBP12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Cps1Q8C196 1500 aa12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Ccdc171E9Q1U1 1324 aa12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Eya1P97767 591 aa12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 GnpatP98192 678 aa12.48□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Znf335A2A5K6 1337 aa12.47□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Tnnt1O88346 262 aa12.47□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Egfem1Q8C088 590 aa12.47□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Rlbp1Q9Z275 317 aa12.47□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Vamp4O70480 141 aa12.46□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Ncbp3Q8BZR9 615 aaKnown RBP12.46□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Rreb1Q3UH06 1700 aaKnown RBP12.46□□□□□ -0.41
Rnf41-202ENSMUST00000171342 Zfp777B9EKF4 885 aa12.46□□□□□ -0.42
Rnf41-202ENSMUST00000171342 ChgaP26339 463 aaKnown RBP12.46□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Slain2Q8CI08 581 aa12.46□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Aplp1Q03157 653 aa12.45□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Q3UPC7 1272 aa12.45□□□□□ -0.42
Rnf41-202ENSMUST00000171342 FancaQ9JL70 1439 aa12.45□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Prim1P20664 417 aa12.44□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Rtl5Q5DTT4 599 aa12.44□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Hoxc9P09633 260 aa12.44□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Q3TQI7 289 aaKnown RBP12.44□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Usp32F8VPZ3 1604 aa12.44□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Ric3Q8BPM6 367 aa12.43□□□□□ -0.42
Rnf41-202ENSMUST00000171342 CanxP35564 591 aaKnown RBP12.43□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Fgd1P52734 960 aa12.43□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Ddx17Q501J6 650 aaKnown RBP12.43□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Atf3Q60765 181 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 HypkQ9CR41 129 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Fam135bQ9DAI6 1403 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Amotl2Q8K371 772 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Ipo9Q91YE6 1041 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Tns3Q5SSZ5 1440 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Gimap6Q8K349 305 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Dnajc10Q9DC23 793 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 TimelessQ9R1X4 1197 aa12.42□□□□□ -0.42
Rnf41-202ENSMUST00000171342 KarsQ99MN1 595 aaKnown RBP12.41□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Uhrf1bp1B2KF50 1429 aa12.41□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Abcc10Q8R4P9 1501 aa12.41□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Aldh1l1Q8R0Y6 902 aa12.41□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Hsp90ab1P11499 724 aaKnown RBP12.4□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Cdk12Q14AX6 1484 aaKnown RBP12.4□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Chd4Q6PDQ2 1915 aaKnown RBP12.4□□□□□ -0.42
Rnf41-202ENSMUST00000171342 CemipQ8BI06 1361 aa12.4□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Farp2Q91VS8 1065 aa12.4□□□□□ -0.42
Rnf41-202ENSMUST00000171342 Znf521Q6KAS7 1311 aa12.4□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Ak7Q9D2H2 614 aa12.4□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Nsd3Q6P2L6 1439 aa12.39□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Fmnl2A2APV2 1086 aa12.39□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Tnrc6bQ8BKI2 1810 aaKnown RBP12.38□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Aifm3Q3TY86 605 aa12.38□□□□□ -0.43
Rnf41-202ENSMUST00000171342 AU019823E9PUQ3 292 aa12.38□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Dzip1Q8BMD2 852 aa12.38□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Bcl9Q9D219 1425 aa12.38□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Wdr17E9Q271 1322 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Triml2E9PW10 424 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Gsdma3Q5Y4Y6 464 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Cc2d1aQ8K1A6 943 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Gm10471E9Q1C7 252 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 MvpQ9EQK5 861 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Sos1Q62245 1319 aa12.37□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Ipo8Q7TMY7 1010 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Sv2bQ8BG39 683 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Kcnh5Q920E3 988 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Dixdc1Q80Y83 711 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Tmem2Q5FWI3 1383 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Atp7bQ64446 1462 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Ccdc183A2AJB1 534 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Pnmal2G3X9N3 661 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 AampJ3QN89 436 aa12.36□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Gm21698A0A087WQP8 267 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Gm21671G3UY31 267 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Rab11fip3Q8CHD8 1047 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Atl3Q91YH5 541 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Chmp4bQ9D8B3 224 aaKnown RBP12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Ppp2r3aB2RXC8 1150 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Rapgef3Q8VCC8 918 aa12.35□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Ankrd44B2RXR6 993 aa12.34□□□□□ -0.43
Rnf41-202ENSMUST00000171342 Bcl2l13P59017 434 aa12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Eif2s2Q99L45 331 aaKnown RBP12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Kif1aP33173 1695 aa12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Arap3Q8R5G7 1538 aa12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Rims2Q9EQZ7 1530 aa12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 SkilQ60665 675 aa12.33□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Znf541Q0GGX2 1363 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Mfap1aC0HKD8 439 aaKnown RBP12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Mfap1bC0HKD9 439 aaKnown RBP12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Map7O88735 730 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Fam83gQ5SWY7 812 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ncoa4Q5U4H9 625 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ncapd2Q8K2Z4 1392 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Zranb3Q6NZP1 1069 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ano8Q6PB70 1060 aa12.32□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ccdc146E9Q9F7 977 aa12.31□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Chpf2Q3UU43 768 aa12.31□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Dnai1Q8C0M8 701 aa12.31□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ppm1gQ61074 542 aa12.31□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Parp14Q2EMV9 1817 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Topaz1E5FYH1 1653 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms