RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Chmp5Q9D7S9 219 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Znf704Q9ERQ3 566 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Hoxb7P09024 217 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Nkx1-2P42580 305 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Kcnh8P59111 1102 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 MpndQ3TV65 487 aa7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Ccar1Q8CH18 1146 aaKnown RBP7.95□□□□□ -1.14
Lig4-202ENSMUST00000170033 Naip7Q9JIB3 1402 aa7.94□□□□□ -1.14
Lig4-202ENSMUST00000170033 NalcnQ8BXR5 1738 aa7.94□□□□□ -1.14
Lig4-202ENSMUST00000170033 Tmem132aQ922P8 1018 aa7.94□□□□□ -1.14
Lig4-202ENSMUST00000170033 Cdk12Q14AX6 1484 aaKnown RBP7.94□□□□□ -1.14
Lig4-202ENSMUST00000170033 Hoxa7P02830 229 aa7.93□□□□□ -1.14
Lig4-202ENSMUST00000170033 Gm156Q58A37 223 aa7.93□□□□□ -1.14
Lig4-202ENSMUST00000170033 Ttc21aQ8C0S4 1314 aa7.93□□□□□ -1.14
Lig4-202ENSMUST00000170033 AU015836B2RUM3 263 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Ipo8Q7TMY7 1010 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Sirt1Q923E4 737 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 N4bp2F8VQG7 1678 aaKnown RBP7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Gsto1O09131 240 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Erich4Q3UNU4 136 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Dnai1Q8C0M8 701 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Pik3r4Q8VD65 1358 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 PtpruB1AUH1 1446 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Slit3Q9WVB4 1523 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Cavin4A2AMM0 362 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Mkrn3Q60764 544 aa7.92□□□□□ -1.14
Lig4-202ENSMUST00000170033 Arid3cA6PWV5 409 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Ppp1r1bQ60829 194 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Trim28Q62318 834 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Paxip1Q6NZQ4 1056 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Znf335A2A5K6 1337 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Yeats2Q3TUF7 1407 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Gtpbp6Q3U6U5 514 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Sos1Q62245 1319 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Cavin2Q63918 418 aaKnown RBP7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 NpatQ8BMA5 1420 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Pdlim2Q8R1G6 349 aa7.91□□□□□ -1.14
Lig4-202ENSMUST00000170033 Ptpn23Q6PB44 1692 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Rad17Q6NXW6 688 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Noc3lQ8VI84 807 aaKnown RBP7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Mon2Q80TL7 1715 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Cep170bQ80U49 1574 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Med1Q925J9 1575 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Wwc1Q5SXA9 1104 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Themis2Q91YX0 663 aa7.9□□□□□ -1.14
Lig4-202ENSMUST00000170033 Slit2Q9R1B9 1521 aa7.9□□□□□ -1.15
Lig4-202ENSMUST00000170033 Nom1Q3UFM5 854 aaKnown RBP7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Myo5bP21271 1818 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Scn7aB1AYL1 1681 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Plin1Q8CGN5 517 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ankrd50F7BE84 1390 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Phlpp2Q8BXA7 1320 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ppp2r3aB2RXC8 1150 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Map7O88735 730 aa7.89□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ncapd2Q8K2Z4 1392 aa7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ppp1r15aP17564 657 aa7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ppp1r9bQ6R891 817 aaKnown RBP7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Htatsf1Q8BGC0 757 aa7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Tsen2Q6P7W5 460 aa7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Exosc9Q9JHI7 438 aaKnown RBP7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Chd4Q6PDQ2 1915 aaKnown RBP7.88□□□□□ -1.15
Lig4-202ENSMUST00000170033 Chrm1P12657 460 aa7.87□□□□□ -1.15
Lig4-202ENSMUST00000170033 P2rx7Q9Z1M0 595 aa7.87□□□□□ -1.15
Lig4-202ENSMUST00000170033 D430041D05RikF6ZGR6 1678 aa7.87□□□□□ -1.15
Lig4-202ENSMUST00000170033 Frmpd2A0A140LI67 1392 aa7.87□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ccdc183A2AJB1 534 aa7.87□□□□□ -1.15
Lig4-202ENSMUST00000170033 Trpm3Q5F4S9 1721 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 PzpQ61838 1495 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 CanxP35564 591 aaKnown RBP7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 CastP51125 788 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 Tbc1d32Q3URV1 1296 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 Dmrt2Q8BG36 561 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 Swt1Q9DBQ9 907 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 NinlQ6ZQ12 1394 aa7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 Rreb1Q3UH06 1700 aaKnown RBP7.86□□□□□ -1.15
Lig4-202ENSMUST00000170033 Astn2Q80Z10 1352 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 CemipQ8BI06 1361 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Duxf3A0A0N4SV92 674 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Klhl34A2AI76 644 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Cetn4Q8K4K1 168 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Stac3Q8BZ71 360 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Adamtsl3G3UXC7 1706 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Tet3Q8BG87 1668 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Rabep1O35551 862 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Tex2Q6ZPJ0 1128 aaKnown RBP7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Idi2Q8BFZ6 227 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Gys2Q8VCB3 704 aa7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 U2af1Q9D883 239 aaKnown RBP7.85□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ubr1O70481 1757 aa7.84□□□□□ -1.15
Lig4-202ENSMUST00000170033 Ercc6l2Q9JIM3 1537 aa7.84□□□□□ -1.15
Lig4-202ENSMUST00000170033 Hap1O35668 628 aa7.84□□□□□ -1.15
Lig4-202ENSMUST00000170033 Dip2bQ3UH60 1574 aa7.84□□□□□ -1.15
Lig4-202ENSMUST00000170033 Chmp4cQ9D7F7 232 aa7.84□□□□□ -1.15
Lig4-202ENSMUST00000170033 Neurod2Q62414 383 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 Shq1Q7TMX5 569 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 PogkQ80TC5 607 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 Als2Q920R0 1651 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 Gnai1B2RSH2 354 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 Cgnl1Q6AW69 1298 aa7.83□□□□□ -1.16
Lig4-202ENSMUST00000170033 Cdk19Q8BWD8 501 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms