RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 CarsQ9ER72 831 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Gse1Q3U3C9 1213 aa14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 PalmQ9Z0P4 383 aa14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Rbm27Q5SFM8 1060 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Rnf214Q8BFU3 668 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Kiaa0753Q6A000 959 aa14.11□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Ttc21aQ8C0S4 1314 aa14.11□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 CalcaP70160 136 aa14.11□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Hs1bp3Q3TC93 395 aa14.11□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Smarca5Q91ZW3 1051 aaKnown RBP14.11□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Hecw1Q8K4P8 1604 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 InsrP15208 1372 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 1700019A02RikA0A087WPV9 146 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Gm9992B2RWK3 458 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Unc93aQ710D3 458 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 FanciQ8K368 1330 aa14.1□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Lmod3E9QA62 571 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 FanclQ9CR14 375 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Mcm10Q0VBD2 885 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Klhdc4Q921I2 584 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Cdk5rap2Q8K389 1822 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Nsd3Q6P2L6 1439 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Zfyve16Q80U44 1528 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Triml2E9PW10 424 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Birc3O08863 600 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Aldh1l1Q8R0Y6 902 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 MvpQ9EQK5 861 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Lemd3Q9WU40 921 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 CenpjQ569L8 1344 aa14.09□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Trim27Q62158 513 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Isy1Q69ZQ2 285 aaKnown RBP14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Cdc37l1Q9CZP7 335 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Gdpd2Q9ESM6 539 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Neurl4Q5NCX5 1563 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Xrn1P97789 1719 aaKnown RBP14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Vamp4O70480 141 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Kdm4cQ8VCD7 1054 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Swt1Q9DBQ9 907 aa14.08□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Mknk2Q8CDB0 459 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Gadd45bP22339 160 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 EngaseQ8BX80 734 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Rims1Q99NE5 1463 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Kidins220E9Q9B7 1793 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Syce3B5KM66 88 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Sh3bp1P55194 680 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Gtpbp6Q3U6U5 514 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Ppip5k2Q6ZQB6 1129 aa14.07□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Abca6Q8K441 1624 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Abca9Q8K449 1623 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Pibf1E9Q6K3 756 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Ccdc171E9Q1U1 1324 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Ankrd44B2RXR6 993 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 LifrP42703 1092 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Gpatch11Q3UFS4 262 aa14.06□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Aifm3Q3TY86 605 aa14.05□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Efcab6Q6P1E8 1516 aa14.05□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Cetn4Q8K4K1 168 aa14.05□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Usp16Q99LG0 825 aa14.04□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 4931400O07RikQ9D4M5 137 aa14.04□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Cc2d1aQ8K1A6 943 aa14.04□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Gzf1Q4VBD9 706 aa14.04□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Zdhhc9P59268 364 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Igsf3Q6ZQA6 1194 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Myo5cE9Q1F5 1742 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Wwc1Q5SXA9 1104 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 1700010I14RikQ7TPG0 532 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Zkscan1Q8BGS3 561 aaKnown RBP14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Ric3Q8BPM6 367 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Fam114a1Q9D281 569 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Ush1cQ9ES64 910 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Cabp2Q9JLK4 216 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Pik3r4Q8VD65 1358 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Naip7Q9JIB3 1402 aa14.03□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 NinlQ6ZQ12 1394 aa14.02□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Nol12Q8BG17 217 aa14.02□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Fam13bQ8K2H3 851 aa14.02□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Iqgap3F8VQ29 1632 aa14.02□□□□□ -0.16
Prpf40b-208ENSMUST00000136980 Lrrc7Q80TE7 1490 aa14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Cpa2Q504N0 417 aa14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Eif4g2Q62448 906 aaKnown RBP14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Shq1Q7TMX5 569 aa14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Ppp6r3Q922D4 844 aa14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 PalldQ9ET54 1408 aa14.02□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Pdia3P27773 505 aaKnown RBP14.01□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Q9D2X8 372 aa14.01□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Abca17E9PX95 1733 aa14□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Ttc37F8VPK0 1563 aa14□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Pnma3Q8JZW8 466 aa14□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Cyp27a1Q9DBG1 533 aa14□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Zscan25B2RX31 543 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 CenppQ9CZ92 286 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Ccdc94Q9D6J3 314 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Ncapd2Q8K2Z4 1392 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 ErmnQ5EBJ4 281 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Sh3bp5Q9Z131 463 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Arid3aQ62431 601 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Sytl4Q9R0Q1 673 aa13.99□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Becn1O88597 448 aa13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Nucb1Q02819 459 aaKnown RBP13.98□□□□□ -0.17
Prpf40b-208ENSMUST00000136980 Prune1Q8BIW1 454 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms