RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Hoxc9P09633 260 aa12.73□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Cypt2Q6P924 180 aa12.73□□□□□ -0.37
Prpf39-201ENSMUST00000120580 PaskQ8CEE6 1383 aa12.71□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Kif24Q6NWW5 1356 aa12.71□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Farp2Q91VS8 1065 aa12.71□□□□□ -0.37
Prpf39-201ENSMUST00000120580 Pip4k2bQ80XI4 416 aa12.7□□□□□ -0.38
Prpf39-201ENSMUST00000120580 GsdmaQ9EST1 446 aa12.7□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Mak16Q8BGS0 296 aaKnown RBP12.7□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Slc24a1Q91WD8 1130 aa12.69□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Bcl2l12Q9D3J3 255 aa12.69□□□□□ -0.38
Prpf39-201ENSMUST00000120580 PalmQ9Z0P4 383 aa12.69□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Ppp1r37Q8BKR5 712 aa12.69□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Evi5lH3BKQ3 813 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Dennd6aQ8BH65 605 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Ttc21aQ8C0S4 1314 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 TimelessQ9R1X4 1197 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 C4bP01029 1738 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Kdm6aO70546 1401 aa12.68□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Pard3Q99NH2 1333 aa12.67□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Simc1E9Q6E9 1354 aa12.67□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Znf521Q6KAS7 1311 aa12.67□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Col22a1E9Q7P1 1613 aa12.66□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Eya1P97767 591 aa12.66□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Atxn3Q9CVD2 355 aa12.66□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Slx1bQ8BX32 270 aa12.65□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Fchsd2Q3USJ8 740 aa12.65□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Ank1Q02357 1862 aa12.65□□□□□ -0.38
Prpf39-201ENSMUST00000120580 Ankrd50F7BE84 1390 aa12.64□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Mcm10Q0VBD2 885 aa12.64□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Aox2Q5SGK3 1345 aa12.64□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Apaf1O88879 1249 aa12.63□□□□□ -0.39
Prpf39-201ENSMUST00000120580 GnpatP98192 678 aa12.63□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Cyb5rlB1AS42 316 aa12.63□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Ap3b2Q9JME5 1082 aa12.63□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Sox12Q04890 314 aa12.62□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Tmem132eQ6IEE6 982 aa12.62□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Dnajc10Q9DC23 793 aa12.61□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Ddx60E9PZQ1 1711 aa12.61□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Tsen2Q6P7W5 460 aa12.61□□□□□ -0.39
Prpf39-201ENSMUST00000120580 TnikP83510 1323 aa12.61□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Dzip1Q8BMD2 852 aa12.6□□□□□ -0.39
Prpf39-201ENSMUST00000120580 CrbnQ8C7D2 445 aa12.6□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Arap2Q8BZ05 1703 aa12.6□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Ybx3Q9JKB3 361 aaKnown RBP12.6□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Pnpla7A2AJ88 1352 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Plch1Q4KWH5 1682 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Cdhr2E9Q7P9 1308 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Kcnh8P59111 1102 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Pak3Q61036 559 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Dixdc1Q80Y83 711 aa12.59□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Ttll13A4Q9F6 804 aa12.58□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Card10P58660 1021 aa12.58□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Tcerg1Q8CGF7 1100 aaKnown RBP12.58□□□□□ -0.39
Prpf39-201ENSMUST00000120580 Phf23Q8BSN5 401 aa12.58□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Golga2Q921M4 999 aa12.58□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Smim5Q8BT42 78 aa12.57□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Hspa1lP16627 641 aa12.57□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Dusp27Q148W8 1138 aa12.57□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Gimap6Q8K349 305 aa12.57□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Ccne1Q61457 408 aa12.57□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Greb1lB9EJV3 1913 aa12.56□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Ccdc30Q8BVF4 654 aa12.56□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Atf3Q60765 181 aa12.56□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Cadps2Q8BYR5 1297 aa12.56□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Plekhh1Q80TI1 1356 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Abcc12Q80WJ6 1366 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Kcnh5Q920E3 988 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Birc3O08863 600 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 RgmbQ7TQ33 436 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Cntnap1O54991 1385 aa12.55□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Snap23O09044 210 aa12.54□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Ankrd31A0A140LI88 1765 aa12.54□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Cavin4A2AMM0 362 aa12.54□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Ofd1Q80Z25 1017 aa12.54□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Gm21190A0A0G2JGJ6 266 aa12.53□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Ralbp1Q62172 648 aa12.53□□□□□ -0.4
Prpf39-201ENSMUST00000120580 NgefQ8CHT1 710 aa12.53□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Nav1Q8CH77 1875 aa12.53□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Amotl2Q8K371 772 aa12.52□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Fyb1O35601 819 aa12.52□□□□□ -0.4
Prpf39-201ENSMUST00000120580 Igsf1Q7TQA1 1317 aa12.52□□□□□ -0.41
Prpf39-201ENSMUST00000120580 MpripP97434 1024 aa12.52□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Prdm10Q3UTQ7 1184 aa12.52□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Cyp2d12Q8BVD2 504 aa12.52□□□□□ -0.41
Prpf39-201ENSMUST00000120580 CastP51125 788 aa12.51□□□□□ -0.41
Prpf39-201ENSMUST00000120580 U2af1Q9D883 239 aaKnown RBP12.51□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Lama4P97927 1816 aa12.5□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Cabp2Q9JLK4 216 aa12.5□□□□□ -0.41
Prpf39-201ENSMUST00000120580 CrklP47941 303 aa12.49□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Ciz1Q8VEH2 845 aa12.49□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Golgb1E9PVZ8 3238 aa12.49□□□□□ -0.41
Prpf39-201ENSMUST00000120580 MarsQ68FL6 902 aaKnown RBP12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Txnrd1Q9JMH6 613 aa12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 OptnQ8K3K8 584 aa12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Lrp5Q91VN0 1614 aa12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Foxp4Q9DBY0 795 aaKnown RBP12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Ppp1r3fQ9JIG4 799 aa12.48□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Nsd3Q6P2L6 1439 aa12.47□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Col4a5Q63ZW6 1691 aa12.47□□□□□ -0.41
Prpf39-201ENSMUST00000120580 Cabp4Q8VHC5 271 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms