RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Znf330Q922H9 316 aa13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 HnrnpmQ9D0E1 729 aaKnown RBP13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Dip2aQ8BWT5 1523 aa13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Plcb2A3KGF7 1181 aa13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Rabep1O35551 862 aa13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Znf521Q6KAS7 1311 aa13.56□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Exosc9Q9JHI7 438 aaKnown RBP13.55□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Topaz1E5FYH1 1653 aa13.55□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Gemin5Q8BX17 1502 aaKnown RBP13.55□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 GphnQ8BUV3 769 aaKnown RBP13.55□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Abca14E9Q8F8 1683 aa13.54□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Catsper2A2ARP9 588 aa13.54□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 MaddQ80U28 1577 aa13.54□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 U2af1Q9D883 239 aaKnown RBP13.54□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Cdk19Q8BWD8 501 aa13.53□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Scaf11E9PZM7 1456 aaKnown RBP13.53□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 KdrP35918 1367 aa13.53□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Ssh1Q76I79 1042 aa13.53□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 ErmnQ5EBJ4 281 aa13.52□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Tsen2Q6P7W5 460 aa13.52□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 InsrP15208 1372 aa13.52□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Rfx1P48377 963 aa13.52□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Antxr1Q9CZ52 562 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Slit3Q9WVB4 1523 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Il4rP16382 810 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Mcm4P49717 862 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Paxip1Q6NZQ4 1056 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 PzpQ61838 1495 aa13.51□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Tbc1d32Q3URV1 1296 aa13.5□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Bcl9Q9D219 1425 aa13.5□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Senp3Q9EP97 568 aaKnown RBP13.5□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Phf14Q9D4H9 881 aa13.49□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Gsto1O09131 240 aa13.49□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Plekhg1F6S200 1446 aa13.49□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Ccar1Q8CH18 1146 aaKnown RBP13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Fam135bQ9DAI6 1403 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Nutm1Q8BHP2 1126 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Iqsec2Q5DU25 1478 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 SlkO54988 1233 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Ripply1Q2WG77 201 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Nwd1A6H603 1563 aa13.48□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Chrm1P12657 460 aa13.47□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Aplp1Q03157 653 aa13.47□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 AU019823E9PUQ3 292 aa13.47□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Terf2O35144 541 aa13.46□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Dusp27Q148W8 1138 aa13.46□□□□□ -0.25
Prpf40b-202ENSMUST00000118287 Cog6Q8R3I3 657 aa13.45□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Atl3Q91YH5 541 aa13.45□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 NktrP30415 1453 aa13.45□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Nsfl1cQ9CZ44 370 aaKnown RBP13.45□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Sh3bp5Q9Z131 463 aa13.45□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 GorabQ8BRM2 368 aa13.44□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Kif18aQ91WD7 886 aa13.44□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Usp32F8VPZ3 1604 aa13.44□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Cps1Q8C196 1500 aa13.44□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Dhx30Q99PU8 1217 aaKnown RBP13.44□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Q3UJC8 639 aa13.43□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Map7O88735 730 aa13.43□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Nectin2P32507 530 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Ccdc60Q8C4J0 545 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Kif2cQ922S8 721 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Trim44Q9QXA7 346 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Phlpp2Q8BXA7 1320 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Tmco5bQ80X59 307 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Hs1bp3Q3TC93 395 aa13.42□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 NinlQ6ZQ12 1394 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Tmem94Q7TSH8 1360 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Maco1Q7TQE6 664 aaKnown RBP13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Map3k19E9Q3S4 1311 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Pip4k2bQ80XI4 416 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Pik3c2bE9QAN8 1632 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Rims2Q9EQZ7 1530 aa13.41□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Rimbp3Q3V0F0 1606 aa13.4□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Pik3r4Q8VD65 1358 aa13.4□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Tnnt2P50752 301 aa13.4□□□□□ -0.26
Prpf40b-202ENSMUST00000118287 Adgrl1Q80TR1 1466 aa13.39□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Kif20aP97329 887 aa13.39□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Dmrtc1Q9D9R7 182 aa13.39□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Tfip11Q9ERA6 838 aaKnown RBP13.39□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 CastP51125 788 aa13.39□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 FanciQ8K368 1330 aa13.38□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Cavin4A2AMM0 362 aa13.38□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Ciz1Q8VEH2 845 aa13.38□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Stk11ipQ3TAA7 1072 aa13.38□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Nrxn1Q9CS84 1514 aa13.38□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Rreb1Q3UH06 1700 aaKnown RBP13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Gm10563F6WIE4 79 aa13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Arap3Q8R5G7 1538 aa13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Brwd3A2AHJ4 1799 aa13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 SkilQ60665 675 aa13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Scn4aQ9ER60 1841 aa13.37□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Rbm25B2RY56 838 aaKnown RBP13.36□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Ddit3P35639 168 aa13.35□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Rsph3aQ3UFY4 516 aa13.35□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 KnstrnQ9D9Z1 312 aaKnown RBP13.35□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Idi1P58044 227 aa13.35□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Nom1Q3UFM5 854 aaKnown RBP13.35□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 G3bp1P97855 465 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Rrp12Q6P5B0 1295 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Idi2Q8BFZ6 227 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms