RNA–Protein interactions for RNA: ENSMUST00000117958.7

Nde1-203, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

TSL 1 (best) BASIC

Gene Nde1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-203ENSMUST00000117958 Usp19Q3UJD6 1360 aa17.31■□□□□ 0.36
Nde1-203ENSMUST00000117958 Phf23Q8BSN5 401 aa17.31■□□□□ 0.36
Nde1-203ENSMUST00000117958 Lrrc59Q922Q8 307 aaKnown RBP17.31■□□□□ 0.36
Nde1-203ENSMUST00000117958 Iqcf3Q9D498 203 aa17.31■□□□□ 0.36
Nde1-203ENSMUST00000117958 Ccne1Q61457 408 aa17.3■□□□□ 0.36
Nde1-203ENSMUST00000117958 Slx1bQ8BX32 270 aa17.3■□□□□ 0.36
Nde1-203ENSMUST00000117958 Slit2Q9R1B9 1521 aa17.3■□□□□ 0.36
Nde1-203ENSMUST00000117958 TkfcQ8VC30 578 aa17.29■□□□□ 0.36
Nde1-203ENSMUST00000117958 Parp14Q2EMV9 1817 aa17.28■□□□□ 0.36
Nde1-203ENSMUST00000117958 Arhgef1Q61210 920 aaKnown RBP17.28■□□□□ 0.36
Nde1-203ENSMUST00000117958 Anks4bQ8K3X6 423 aa17.28■□□□□ 0.36
Nde1-203ENSMUST00000117958 Tmem132eQ6IEE6 982 aa17.28■□□□□ 0.36
Nde1-203ENSMUST00000117958 Znf526Q8BI66 675 aa17.28■□□□□ 0.36
Nde1-203ENSMUST00000117958 Cavin4A2AMM0 362 aa17.27■□□□□ 0.35
Nde1-203ENSMUST00000117958 Eya1P97767 591 aa17.27■□□□□ 0.35
Nde1-203ENSMUST00000117958 Ralbp1Q62172 648 aa17.27■□□□□ 0.35
Nde1-203ENSMUST00000117958 Ofd1Q80Z25 1017 aa17.27■□□□□ 0.35
Nde1-203ENSMUST00000117958 Gsdma3Q5Y4Y6 464 aa17.26■□□□□ 0.35
Nde1-203ENSMUST00000117958 Uhrf1bp1B2KF50 1429 aa17.25■□□□□ 0.35
Nde1-203ENSMUST00000117958 Plekhd1B2RPU2 505 aa17.25■□□□□ 0.35
Nde1-203ENSMUST00000117958 Stk31Q99MW1 1018 aa17.25■□□□□ 0.35
Nde1-203ENSMUST00000117958 Q4VA45 678 aa17.24■□□□□ 0.35
Nde1-203ENSMUST00000117958 Bcl2l12Q9D3J3 255 aa17.24■□□□□ 0.35
Nde1-203ENSMUST00000117958 Slit1Q80TR4 1531 aa17.24■□□□□ 0.35
Nde1-203ENSMUST00000117958 MpripP97434 1024 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Rtl5Q5DTT4 599 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Acsbg1Q99PU5 721 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Pard3Q99NH2 1333 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Simc1E9Q6E9 1354 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Apaf1O88879 1249 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 CrklP47941 303 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 OptnQ8K3K8 584 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 Zeb2Q9R0G7 1215 aa17.23■□□□□ 0.35
Nde1-203ENSMUST00000117958 HypkQ9CR41 129 aa17.22■□□□□ 0.35
Nde1-203ENSMUST00000117958 Txnrd1Q9JMH6 613 aa17.22■□□□□ 0.35
Nde1-203ENSMUST00000117958 TnikP83510 1323 aa17.22■□□□□ 0.35
Nde1-203ENSMUST00000117958 Znf710Q3U288 666 aa17.21■□□□□ 0.35
Nde1-203ENSMUST00000117958 CrbnQ8C7D2 445 aa17.21■□□□□ 0.35
Nde1-203ENSMUST00000117958 Zfp444Q3TDV8 331 aaKnown RBP17.2■□□□□ 0.34
Nde1-203ENSMUST00000117958 Swt1Q9DBQ9 907 aa17.2■□□□□ 0.34
Nde1-203ENSMUST00000117958 FocadA2AKG8 1798 aa17.2■□□□□ 0.34
Nde1-203ENSMUST00000117958 Speer4f1Q9D5Q6 258 aa17.19■□□□□ 0.34
Nde1-203ENSMUST00000117958 Col15a1O35206 1367 aa17.19■□□□□ 0.34
Nde1-203ENSMUST00000117958 Ddx54Q8K4L0 874 aaKnown RBP17.19■□□□□ 0.34
Nde1-203ENSMUST00000117958 Trpm3Q5F4S9 1721 aa17.18■□□□□ 0.34
Nde1-203ENSMUST00000117958 Smim5Q8BT42 78 aa17.18■□□□□ 0.34
Nde1-203ENSMUST00000117958 Tcerg1Q8CGF7 1100 aaKnown RBP17.18■□□□□ 0.34
Nde1-203ENSMUST00000117958 Emilin2Q8K482 1074 aa17.18■□□□□ 0.34
Nde1-203ENSMUST00000117958 Dusp27Q148W8 1138 aa17.17■□□□□ 0.34
Nde1-203ENSMUST00000117958 RgmbQ7TQ33 436 aa17.16■□□□□ 0.34
Nde1-203ENSMUST00000117958 Ppp1r37Q8BKR5 712 aa17.16■□□□□ 0.34
Nde1-203ENSMUST00000117958 Amotl1Q9D4H4 968 aa17.16■□□□□ 0.34
Nde1-203ENSMUST00000117958 TmpoQ61033 693 aaKnown RBP17.15■□□□□ 0.34
Nde1-203ENSMUST00000117958 Mcm10Q0VBD2 885 aa17.15■□□□□ 0.34
Nde1-203ENSMUST00000117958 Rad21Q61550 635 aaKnown RBP17.15■□□□□ 0.34
Nde1-203ENSMUST00000117958 Ggt6Q6PDE7 497 aa17.15■□□□□ 0.34
Nde1-203ENSMUST00000117958 Fbxo41Q6NS60 873 aa17.14■□□□□ 0.33
Nde1-203ENSMUST00000117958 Cabp2Q9JLK4 216 aa17.14■□□□□ 0.33
Nde1-203ENSMUST00000117958 Arfgef2A2A5R2 1792 aa17.14■□□□□ 0.33
Nde1-203ENSMUST00000117958 Upf2A2AT37 1269 aaKnown RBP17.13■□□□□ 0.33
Nde1-203ENSMUST00000117958 Gm10471E9Q1C7 252 aa17.13■□□□□ 0.33
Nde1-203ENSMUST00000117958 Zpr1Q62384 459 aa17.13■□□□□ 0.33
Nde1-203ENSMUST00000117958 Ccdc30Q8BVF4 654 aa17.13■□□□□ 0.33
Nde1-203ENSMUST00000117958 Zranb3Q6NZP1 1069 aa17.12■□□□□ 0.33
Nde1-203ENSMUST00000117958 Rtf1A2AQ19 715 aaKnown RBP17.11■□□□□ 0.33
Nde1-203ENSMUST00000117958 ThemisQ8BGW0 636 aa17.11■□□□□ 0.33
Nde1-203ENSMUST00000117958 4930572O03RikQ8C5Y0 211 aa17.11■□□□□ 0.33
Nde1-203ENSMUST00000117958 Ttc41Q692V3 1318 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Aplp2Q06335 707 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Pak3Q61036 559 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Plin1Q8CGN5 517 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Cc2d1aQ8K1A6 943 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Shank2Q80Z38 1476 aa17.1■□□□□ 0.33
Nde1-203ENSMUST00000117958 Adgrb1Q3UHD1 1582 aa17.09■□□□□ 0.33
Nde1-203ENSMUST00000117958 Nup153E9Q3G8 1462 aaKnown RBP17.09■□□□□ 0.33
Nde1-203ENSMUST00000117958 Cntnap1O54991 1385 aa17.08■□□□□ 0.33
Nde1-203ENSMUST00000117958 Ahnak2E9PYB0 1738 aaKnown RBP17.08■□□□□ 0.33
Nde1-203ENSMUST00000117958 Neurod2Q62414 383 aa17.08■□□□□ 0.32
Nde1-203ENSMUST00000117958 Nhsl1Q8CAF4 1587 aa17.08■□□□□ 0.32
Nde1-203ENSMUST00000117958 Abcc12Q80WJ6 1366 aa17.08■□□□□ 0.32
Nde1-203ENSMUST00000117958 NudcO35685 332 aaKnown RBP17.07■□□□□ 0.32
Nde1-203ENSMUST00000117958 Nyap1Q6PFX7 833 aa17.07■□□□□ 0.32
Nde1-203ENSMUST00000117958 Fnbp4Q6ZQ03 1031 aa17.07■□□□□ 0.32
Nde1-203ENSMUST00000117958 Pm20d1Q8C165 503 aa17.07■□□□□ 0.32
Nde1-203ENSMUST00000117958 Gnai1B2RSH2 354 aa17.06■□□□□ 0.32
Nde1-203ENSMUST00000117958 InhbeO08717 350 aa17.06■□□□□ 0.32
Nde1-203ENSMUST00000117958 Gnai3Q9DC51 354 aa17.06■□□□□ 0.32
Nde1-203ENSMUST00000117958 Mst1rQ62190 1378 aa17.06■□□□□ 0.32
Nde1-203ENSMUST00000117958 Tnnt3Q9QZ47 272 aa17.06■□□□□ 0.32
Nde1-203ENSMUST00000117958 Plekhh1Q80TI1 1356 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Tnks1bp1P58871 1720 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Sos1Q62245 1319 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Ttc21aQ8C0S4 1314 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Sema6bO54951 886 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Ginm1Q91WR6 327 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Kat6bQ8BRB7 1872 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Kank1E9Q238 1360 aa17.05■□□□□ 0.32
Nde1-203ENSMUST00000117958 Vps33bP59016 617 aa17.04■□□□□ 0.32
Nde1-203ENSMUST00000117958 Ankrd50F7BE84 1390 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms