RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Slc4a10Q5DTL9 1118 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Pes1Q9EQ61 584 aaKnown RBP10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Nphp1Q9QY53 687 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 PalldQ9ET54 1408 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 NexnQ7TPW1 607 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Pdlim2Q8R1G6 349 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Skint5A7XUY5 1461 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Tulp4Q9JIL5 1547 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Sox12Q04890 314 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Ints3Q7TPD0 1041 aaKnown RBP10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Iffo2Q8R2V2 512 aa10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Scaf11E9PZM7 1456 aaKnown RBP10.17□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Ttc21aQ8C0S4 1314 aa10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Smc3Q9CW03 1217 aaKnown RBP10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Mroh2aD3Z750 1679 aa10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Trim30aP15533 496 aa10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Pabpn1Q8CCS6 302 aaKnown RBP10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 EzrP26040 586 aaKnown RBP10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 MpripP97434 1024 aa10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Cavin2Q63918 418 aaKnown RBP10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Nap1l3Q794H2 544 aa10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Utp3Q9JI13 469 aaKnown RBP10.16□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Iqgap1Q9JKF1 1657 aaKnown RBP10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Trim27Q62158 513 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Rusc2Q80U22 1514 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Kif3aP28741 701 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Znf521Q6KAS7 1311 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Aldh8a1Q8BH00 487 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 CenppQ9CZ92 286 aa10.15□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Vamp4O70480 141 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Cchcr1Q8K2I2 770 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ap3b2Q9JME5 1082 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Prkar2bP31324 416 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Clcn1Q64347 994 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Kdm4cQ8VCD7 1054 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Sh3bp5Q9Z131 463 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Cep170Q6A065 1588 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Pdcl2Q78Y63 240 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Chmp4cQ9D7F7 232 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 KdrP35918 1367 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Neurl4Q5NCX5 1563 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Clasp1Q80TV8 1535 aaKnown RBP10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Rasa1E9PYG6 1038 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Kiaa0754Q69ZZ9 979 aa10.14□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Kif1bQ60575 1816 aaKnown RBP10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 TmpoQ61033 693 aaKnown RBP10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Tceal9Q9DD24 104 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 ScaperF8VQ70 1398 aaKnown RBP10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Pnmal2G3X9N3 661 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Il4rP16382 810 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Zranb1Q7M760 708 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Srgap3Q812A2 1099 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Rassf8Q8CJ96 419 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Dhx30Q99PU8 1217 aaKnown RBP10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 4931400O07RikQ9D4M5 137 aa10.13□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Abcc1O35379 1528 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Gm21190A0A0G2JGJ6 266 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Lekr1B2RVN1 116 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Fam184aE9PW83 1143 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Pdia4P08003 638 aaKnown RBP10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Smarca5Q91ZW3 1051 aaKnown RBP10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ak9G3UYQ4 1894 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Kdm5aQ3UXZ9 1690 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Usp54Q8BL06 1588 aaKnown RBP10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Lrrc7Q80TE7 1490 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Syce3B5KM66 88 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Aplp1Q03157 653 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Gpatch11Q3UFS4 262 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Tmem132aQ922P8 1018 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ppp1r3fQ9JIG4 799 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ptpdc1Q6NZK8 747 aa10.12□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ncapd2Q8K2Z4 1392 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Nol12Q8BG17 217 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Jakmip1Q8BVL9 626 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Tpm3P21107 285 aaKnown RBP10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ggnbp2Q5SV77 696 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Gsdma3Q5Y4Y6 464 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ddx11Q6AXC6 880 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Fam13aQ8BGI4 693 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Sh3bgrQ9WUZ7 214 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Ythdc2B2RR83 1445 aaKnown RBP10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Znf518aB2RRF6 1478 aaKnown RBP10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Irf5P56477 497 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Afap1Q80YS6 731 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 PdcQ9QW08 244 aa10.11□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Olfml1Q8BSH2 233 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 FanclQ9CR14 375 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 HypkQ9CR41 129 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Hoxb7P09024 217 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Cwc27Q3TKY6 469 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Rnf20Q5DTM8 973 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Aldh1l2Q8K009 923 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Adamts13Q769J6 1426 aa10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Nucb1Q02819 459 aaKnown RBP10.1□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Pdia3P27773 505 aaKnown RBP10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Antxr1Q9CZ52 562 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Rcan3Q9JKK0 239 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Cfdp1O88271 295 aaKnown RBP10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Idi2Q8BFZ6 227 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Mrps27Q8BK72 415 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms