RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Hoxb7P09024 217 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Hs1bp3Q3TC93 395 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Rsph3aQ3UFY4 516 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Dip2cE9PWR4 1557 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Phlpp2Q8BXA7 1320 aa10.31□□□□□ -0.76
Bdnf-202ENSMUST00000111042 GphnQ8BUV3 769 aaKnown RBP10.3□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Cyp46a1Q9WVK8 500 aa10.3□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Eif2ak4Q9QZ05 1648 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Wwc1Q5SXA9 1104 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Abca17E9PX95 1733 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Trim28Q62318 834 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Smarca5Q91ZW3 1051 aaKnown RBP10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Tfip11Q9ERA6 838 aaKnown RBP10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Brpf1B2RRD7 1212 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Cfdp1O88271 295 aaKnown RBP10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Prkar2bP31324 416 aa10.29□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Gm10471E9Q1C7 252 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Hmox1P14901 289 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Gcc1Q9D4H2 778 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Arhgap23Q69ZH9 1483 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Pnmal2G3X9N3 661 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Evi5lH3BKQ3 813 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Gnai2P08752 355 aaKnown RBP10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Fkbp4P30416 458 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Mcm2P97310 904 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Tmem94Q7TSH8 1360 aa10.28□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Casq1O09165 405 aa10.27□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Tmem132eQ6IEE6 982 aa10.27□□□□□ -0.76
Bdnf-202ENSMUST00000111042 Chmp4cQ9D7F7 232 aa10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Prim1P20664 417 aa10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Ncbp3Q8BZR9 615 aaKnown RBP10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Nphp1Q9QY53 687 aa10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Frmpd2A0A140LI67 1392 aa10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Cwc27Q3TKY6 469 aa10.27□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Cdc42bpgQ80UW5 1551 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Nsd3Q6P2L6 1439 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Tbc1d32Q3URV1 1296 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Srgap3Q812A2 1099 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Fmnl2A2APV2 1086 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Q4VA45 678 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Chmp7Q8R1T1 451 aa10.26□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Wdr63B2RY71 923 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Mphosph10Q810V0 681 aaKnown RBP10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Tmc1Q8R4P5 757 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Plekhg1F6S200 1446 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Trim27Q62158 513 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Gimap6Q8K349 305 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Uhrf1bp1lA2RSJ4 1457 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Phactr2B1AVP0 632 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Brd1E9PZ26 1189 aaKnown RBP10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 RereQ80TZ9 1558 aa10.25□□□□□ -0.77
Bdnf-202ENSMUST00000111042 KdrP35918 1367 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Ahdc1Q6PAL7 1594 aaKnown RBP10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Zkscan2G3X952 960 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Idi1P58044 227 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Tbc1d9Q3UYK3 1264 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Astn2Q80Z10 1352 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Topbp1Q6ZQF0 1515 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 SlkO54988 1233 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 MecomP14404 1042 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Eya1P97767 591 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Aifm3Q3TY86 605 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 FanclQ9CR14 375 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Tceal9Q9DD24 104 aa10.24□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Tecpr2Q3UH45 1423 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Snap23O09044 210 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Gtf3c3Q3TMP1 882 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Fam83gQ5SWY7 812 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Zranb3Q6NZP1 1069 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 PtmsQ9D0J8 101 aaKnown RBP10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Ppip5k2Q6ZQB6 1129 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 1700010I14RikQ7TPG0 532 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Fndc1E9Q043 1732 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Cep170bQ80U49 1574 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 PzpQ61838 1495 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Zmym3Q9JLM4 1370 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Chpf2Q3UU43 768 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Cavin2Q63918 418 aaKnown RBP10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Fam13aQ8BGI4 693 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Mroh1E0CZ22 1640 aa10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Clasp1Q80TV8 1535 aaKnown RBP10.23□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Kiaa0556Q8C753 1610 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Exoc6bA6H5Z3 810 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Map3k13Q1HKZ5 959 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Pde3bQ61409 1100 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Abca8aQ8K442 1620 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Akap12Q9WTQ5 1684 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Atf3Q60765 181 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Ppp1r42Q8R1Z4 357 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Filip1lQ6P6L0 1131 aa10.22□□□□□ -0.77
Bdnf-202ENSMUST00000111042 HdgfP51859 237 aaKnown RBP10.21□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Pip4k2bQ80XI4 416 aa10.21□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Nlgn1Q99K10 843 aa10.21□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Stk3Q9JI10 497 aa10.21□□□□□ -0.77
Bdnf-202ENSMUST00000111042 Med14A2ABV5 1459 aaKnown RBP10.21□□□□□ -0.77
Bdnf-202ENSMUST00000111042 AU015836B2RUM3 263 aa10.21□□□□□ -0.78
Bdnf-202ENSMUST00000111042 Ssh1Q76I79 1042 aa10.21□□□□□ -0.78
Bdnf-202ENSMUST00000111042 LifrP42703 1092 aa10.21□□□□□ -0.78
Bdnf-202ENSMUST00000111042 Btbd11Q6GQW0 1109 aa10.21□□□□□ -0.78
Bdnf-202ENSMUST00000111042 Casc1Q6TDU8 730 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms