RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Fkbp5Q64378 456 aa8.52□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Slf2Q6P9P0 1278 aa8.52□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Gtf3c5Q8R2T8 520 aa8.52□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Tmem94Q7TSH8 1360 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Foxd1Q61345 456 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Nap1l3Q794H2 544 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Nsfl1cQ9CZ44 370 aaKnown RBP8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Filip1lQ6P6L0 1131 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Klhdc4Q921I2 584 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Cspp1B2RX88 1205 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Qtrt2B8ZXI1 415 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ces1aE9PYP1 563 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Fkbp4P30416 458 aa8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Gnai2P08752 355 aaKnown RBP8.51□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Naip2Q9QUK4 1447 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Necab1Q8BG18 352 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Krt84Q99M73 603 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ccdc146E9Q9F7 977 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ttc19Q8CC21 365 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Nap1l5Q9JJF0 156 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Sytl4Q9R0Q1 673 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Dnajc5P60904 198 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ankle2Q6P1H6 964 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Cluap1Q8R3P7 413 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Eif4g3Q80XI3 1579 aaKnown RBP8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Kif21aQ9QXL2 1672 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Vps37dQ810I0 261 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Rbm28Q8CGC6 750 aaKnown RBP8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Lrrc59Q922Q8 307 aaKnown RBP8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Dpp7Q9ET22 506 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Plagl1Q9JLQ4 704 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Fam50bQ9WTJ8 334 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Shroom2A2ALU4 1481 aa8.5□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Rrbp1Q99PL5 1605 aaKnown RBP8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Cfap99A0A140LIX9 648 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Kif20aP97329 887 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ifit1bl2Q3U687 466 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Triml2E9PW10 424 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ipo9Q91YE6 1041 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Bcl2l13P59017 434 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Sin3aQ60520 1274 aaKnown RBP8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 TmpoQ61033 693 aaKnown RBP8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Kcna6Q61923 529 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ankib1Q6ZPS6 1085 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 IkQ9Z1M8 557 aaKnown RBP8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Astn2Q80Z10 1352 aa8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 ImmtQ8CAQ8 757 aaKnown RBP8.49□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Znf18Q810A1 556 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Abcc5Q9R1X5 1436 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Zkscan2G3X952 960 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 RtcbQ99LF4 505 aaKnown RBP8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Olr1Q9EQ09 363 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Pip4k2aO70172 405 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 TrhQ62361 256 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Znf518aB2RRF6 1478 aaKnown RBP8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Ttc14Q9CSP9 761 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 4933402E13RikQ9D4D2 429 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Izumo3A6PWV3 263 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 EappQ5BU09 281 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Zc3h12cQ5DTV4 884 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Soga3Q6NZL0 945 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Sel1lQ9Z2G6 790 aa8.48□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Gtf3c3Q3TMP1 882 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Lrrc45Q8CIM1 670 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Irx3P81067 507 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Cdkl5Q3UTQ8 938 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Rec8Q8C5S7 591 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 OscarQ8VBT3 265 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Taok3Q8BYC6 898 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Eif4g1Q6NZJ6 1600 aaKnown RBP8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Tmc1Q8R4P5 757 aa8.47□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Polr3aB2RXC6 1390 aa8.46□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Myd88P22366 296 aa8.46□□□□□ -1.05
Scn1a-202ENSMUST00000094951 Wasf1Q8R5H6 559 aa8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Ankrd26Q811D2 1581 aa8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Pcmtd1P59913 357 aa8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Arhgef1Q61210 920 aaKnown RBP8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Gli2Q0VGT2 1544 aa8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Arhgef12Q8R4H2 1543 aaKnown RBP8.46□□□□□ -1.06
Scn1a-202ENSMUST00000094951 TbcaP48428 108 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Glg1Q61543 1175 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Zcrb1Q9CZ96 217 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Gpatch8A2A6A1 1505 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Wdr78E9PYY5 807 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 CrebrfQ8CDG5 640 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Fez1Q8K0X8 392 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Erc1Q99MI1 1120 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Erich6bQ9D4S6 220 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Sh3tc1G3X9F6 1346 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Plekho1Q9JIY0 408 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Naip5Q9R016 1403 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Cyp46a1Q9WVK8 500 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 RdxP26043 583 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Gcc1Q9D4H2 778 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Cul5Q9D5V5 780 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Speer4dL7N216 212 aa8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Dnttip2Q8R2M2 758 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Mrpl12Q9DB15 201 aaKnown RBP8.45□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Cyp26c1B2RXA7 518 aa8.44□□□□□ -1.06
Scn1a-202ENSMUST00000094951 Nphp1Q9QY53 687 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms