RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Evi5lH3BKQ3 813 aa16.07■□□□□ 0.16
Lig3-202ENSMUST00000080461 Ncapd2Q8K2Z4 1392 aa16.07■□□□□ 0.16
Lig3-202ENSMUST00000080461 Nckap5lQ6GQX2 1323 aa16.07■□□□□ 0.16
Lig3-202ENSMUST00000080461 Swt1Q9DBQ9 907 aa16.07■□□□□ 0.16
Lig3-202ENSMUST00000080461 Kcna6Q61923 529 aa16.06■□□□□ 0.16
Lig3-202ENSMUST00000080461 Zfp777B9EKF4 885 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Mcm10Q0VBD2 885 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Gimap6Q8K349 305 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Fyb1O35601 819 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Pip4k2bQ80XI4 416 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Prkrip1Q9CWV6 186 aaKnown RBP16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 TimelessQ9R1X4 1197 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Parp14Q2EMV9 1817 aa16.05■□□□□ 0.16
Lig3-202ENSMUST00000080461 Robo1O89026 1612 aa16.04■□□□□ 0.16
Lig3-202ENSMUST00000080461 Slit2Q9R1B9 1521 aa16.03■□□□□ 0.16
Lig3-202ENSMUST00000080461 Nfat5Q9WV30 1534 aa16.03■□□□□ 0.16
Lig3-202ENSMUST00000080461 Farp2Q91VS8 1065 aa16.03■□□□□ 0.16
Lig3-202ENSMUST00000080461 Ptpn23Q6PB44 1692 aa16.02■□□□□ 0.16
Lig3-202ENSMUST00000080461 Ttc21aQ8C0S4 1314 aa16.02■□□□□ 0.16
Lig3-202ENSMUST00000080461 Atf3Q60765 181 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Amigo3Q8C2S7 508 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Mbd3Q9Z2D8 285 aaKnown RBP16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Ankrd50F7BE84 1390 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Hoxc9P09633 260 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 MpripP97434 1024 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Siglec1Q62230 1695 aa16.01■□□□□ 0.15
Lig3-202ENSMUST00000080461 Ccar1Q8CH18 1146 aaKnown RBP16■□□□□ 0.15
Lig3-202ENSMUST00000080461 Iqcf3Q9D498 203 aa16■□□□□ 0.15
Lig3-202ENSMUST00000080461 Ppp1r3fQ9JIG4 799 aa16■□□□□ 0.15
Lig3-202ENSMUST00000080461 Stk31Q99MW1 1018 aa16■□□□□ 0.15
Lig3-202ENSMUST00000080461 Armcx1Q9CX83 456 aa15.99■□□□□ 0.15
Lig3-202ENSMUST00000080461 TnikP83510 1323 aa15.99■□□□□ 0.15
Lig3-202ENSMUST00000080461 Cabp2Q9JLK4 216 aa15.99■□□□□ 0.15
Lig3-202ENSMUST00000080461 Kcnh5Q920E3 988 aa15.98■□□□□ 0.15
Lig3-202ENSMUST00000080461 Eya1P97767 591 aa15.98■□□□□ 0.15
Lig3-202ENSMUST00000080461 CastP51125 788 aa15.97■□□□□ 0.15
Lig3-202ENSMUST00000080461 Egfem1Q8C088 590 aa15.97■□□□□ 0.15
Lig3-202ENSMUST00000080461 Znf330Q922H9 316 aa15.97■□□□□ 0.15
Lig3-202ENSMUST00000080461 Ccne1Q61457 408 aa15.96■□□□□ 0.15
Lig3-202ENSMUST00000080461 Gli3Q61602 1583 aa15.96■□□□□ 0.15
Lig3-202ENSMUST00000080461 GnpatP98192 678 aa15.96■□□□□ 0.15
Lig3-202ENSMUST00000080461 Rbm25B2RY56 838 aaKnown RBP15.96■□□□□ 0.14
Lig3-202ENSMUST00000080461 Ttll13A4Q9F6 804 aa15.95■□□□□ 0.14
Lig3-202ENSMUST00000080461 NudcO35685 332 aaKnown RBP15.95■□□□□ 0.14
Lig3-202ENSMUST00000080461 Trpm3Q5F4S9 1721 aa15.95■□□□□ 0.14
Lig3-202ENSMUST00000080461 DccP70211 1447 aa15.95■□□□□ 0.14
Lig3-202ENSMUST00000080461 Tet3Q8BG87 1668 aa15.95■□□□□ 0.14
Lig3-202ENSMUST00000080461 Tmem132eQ6IEE6 982 aa15.94■□□□□ 0.14
Lig3-202ENSMUST00000080461 TatQ8QZR1 454 aa15.94■□□□□ 0.14
Lig3-202ENSMUST00000080461 Gm6268A2A3U9 297 aa15.94■□□□□ 0.14
Lig3-202ENSMUST00000080461 Gnai1B2RSH2 354 aa15.93■□□□□ 0.14
Lig3-202ENSMUST00000080461 Gnai3Q9DC51 354 aa15.93■□□□□ 0.14
Lig3-202ENSMUST00000080461 Nectin2P32507 530 aa15.93■□□□□ 0.14
Lig3-202ENSMUST00000080461 Cdc37l1Q9CZP7 335 aa15.93■□□□□ 0.14
Lig3-202ENSMUST00000080461 Fmnl2A2APV2 1086 aa15.92■□□□□ 0.14
Lig3-202ENSMUST00000080461 TmpoQ61033 693 aaKnown RBP15.92■□□□□ 0.14
Lig3-202ENSMUST00000080461 Rab11fip3Q8CHD8 1047 aa15.92■□□□□ 0.14
Lig3-202ENSMUST00000080461 Ccdc171E9Q1U1 1324 aa15.92■□□□□ 0.14
Lig3-202ENSMUST00000080461 Brinp3Q499E0 766 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Trim58Q5NCC9 485 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Nutm1Q8BHP2 1126 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Dnajc10Q9DC23 793 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Dzip1Q8BMD2 852 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 TnrQ8BYI9 1358 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Ccdc60Q8C4J0 545 aa15.91■□□□□ 0.14
Lig3-202ENSMUST00000080461 Dixdc1Q80Y83 711 aa15.9■□□□□ 0.14
Lig3-202ENSMUST00000080461 Kdm6aO70546 1401 aa15.9■□□□□ 0.14
Lig3-202ENSMUST00000080461 Kdm2bQ6P1G2 1309 aa15.9■□□□□ 0.14
Lig3-202ENSMUST00000080461 Klhdc4Q921I2 584 aa15.9■□□□□ 0.14
Lig3-202ENSMUST00000080461 Arfgef2A2A5R2 1792 aa15.9■□□□□ 0.14
Lig3-202ENSMUST00000080461 Ddx17Q501J6 650 aaKnown RBP15.89■□□□□ 0.13
Lig3-202ENSMUST00000080461 Znf521Q6KAS7 1311 aa15.89■□□□□ 0.13
Lig3-202ENSMUST00000080461 U2surpQ6NV83 1029 aaKnown RBP15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Sos1Q62245 1319 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Zmym3Q9JLM4 1370 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Duxf3A0A0N4SV92 674 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Tmco5bQ80X59 307 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Chmp5Q9D7S9 219 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Ahnak2E9PYB0 1738 aaKnown RBP15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Rlbp1Q9Z275 317 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 Abca15E9PWH4 1668 aa15.88■□□□□ 0.13
Lig3-202ENSMUST00000080461 1700019A02RikA0A087WPV9 146 aa15.87■□□□□ 0.13
Lig3-202ENSMUST00000080461 HypkQ9CR41 129 aa15.87■□□□□ 0.13
Lig3-202ENSMUST00000080461 Bcl9lQ67FY2 1494 aa15.87■□□□□ 0.13
Lig3-202ENSMUST00000080461 Vamp4O70480 141 aa15.86■□□□□ 0.13
Lig3-202ENSMUST00000080461 Gsdma3Q5Y4Y6 464 aa15.86■□□□□ 0.13
Lig3-202ENSMUST00000080461 Cyb5rlB1AS42 316 aa15.86■□□□□ 0.13
Lig3-202ENSMUST00000080461 Pibf1E9Q6K3 756 aa15.86■□□□□ 0.13
Lig3-202ENSMUST00000080461 Cluap1Q8R3P7 413 aa15.85■□□□□ 0.13
Lig3-202ENSMUST00000080461 AampJ3QN89 436 aa15.85■□□□□ 0.13
Lig3-202ENSMUST00000080461 Snap23O09044 210 aa15.84■□□□□ 0.13
Lig3-202ENSMUST00000080461 Usp16Q99LG0 825 aa15.84■□□□□ 0.13
Lig3-202ENSMUST00000080461 Nid2O88322 1403 aa15.84■□□□□ 0.13
Lig3-202ENSMUST00000080461 G3bp1P97855 465 aaKnown RBP15.84■□□□□ 0.13
Lig3-202ENSMUST00000080461 4930567H17RikQ3V0K5 233 aa15.84■□□□□ 0.13
Lig3-202ENSMUST00000080461 Nol11Q8BJW5 723 aaKnown RBP15.83■□□□□ 0.13
Lig3-202ENSMUST00000080461 Rtf1A2AQ19 715 aaKnown RBP15.83■□□□□ 0.12
Lig3-202ENSMUST00000080461 Adgrb1Q3UHD1 1582 aa15.82■□□□□ 0.12
Lig3-202ENSMUST00000080461 Amotl2Q8K371 772 aa15.82■□□□□ 0.12
Lig3-202ENSMUST00000080461 Atp10bB1AWN4 1474 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms