RNA–Protein interactions for RNA: ENSMUST00000070165.6

Nup98-201, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-201ENSMUST00000070165 Mdc1Q5PSV9 1707 aa16.4■□□□□ 0.22
Nup98-201ENSMUST00000070165 NalcnQ8BXR5 1738 aa16.4■□□□□ 0.22
Nup98-201ENSMUST00000070165 U2surpQ6NV83 1029 aaKnown RBP16.4■□□□□ 0.22
Nup98-201ENSMUST00000070165 Slain2Q8CI08 581 aa16.4■□□□□ 0.22
Nup98-201ENSMUST00000070165 Kdm2bQ6P1G2 1309 aa16.4■□□□□ 0.22
Nup98-201ENSMUST00000070165 Nrxn3Q6P9K9 1571 aa16.39■□□□□ 0.21
Nup98-201ENSMUST00000070165 Scaf1Q5U4C3 1256 aaKnown RBP16.39■□□□□ 0.21
Nup98-201ENSMUST00000070165 Rad17Q6NXW6 688 aa16.39■□□□□ 0.21
Nup98-201ENSMUST00000070165 Liat1Q810M6 228 aa16.39■□□□□ 0.21
Nup98-201ENSMUST00000070165 Senp3Q9EP97 568 aaKnown RBP16.39■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ccne1Q61457 408 aa16.38■□□□□ 0.21
Nup98-201ENSMUST00000070165 Thsd7aQ69ZU6 1645 aa16.38■□□□□ 0.21
Nup98-201ENSMUST00000070165 TmpoQ61033 693 aaKnown RBP16.38■□□□□ 0.21
Nup98-201ENSMUST00000070165 Usp16Q99LG0 825 aa16.38■□□□□ 0.21
Nup98-201ENSMUST00000070165 B4galnt3Q6L8S8 986 aa16.37■□□□□ 0.21
Nup98-201ENSMUST00000070165 TimelessQ9R1X4 1197 aa16.37■□□□□ 0.21
Nup98-201ENSMUST00000070165 Chmp5Q9D7S9 219 aa16.37■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ubr1O70481 1757 aa16.37■□□□□ 0.21
Nup98-201ENSMUST00000070165 Rtf1A2AQ19 715 aaKnown RBP16.37■□□□□ 0.21
Nup98-201ENSMUST00000070165 Hoxc9P09633 260 aa16.36■□□□□ 0.21
Nup98-201ENSMUST00000070165 Tmco5bQ80X59 307 aa16.36■□□□□ 0.21
Nup98-201ENSMUST00000070165 Eya1P97767 591 aa16.36■□□□□ 0.21
Nup98-201ENSMUST00000070165 TatQ8QZR1 454 aa16.36■□□□□ 0.21
Nup98-201ENSMUST00000070165 Map2P20357 1828 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ttll13A4Q9F6 804 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Dbr1Q923B1 550 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 EspnQ9ET47 871 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ano8Q6PB70 1060 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Rab11fip3Q8CHD8 1047 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Znf330Q922H9 316 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Wdr17E9Q271 1322 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Sos1Q62245 1319 aa16.35■□□□□ 0.21
Nup98-201ENSMUST00000070165 Unc13bQ9Z1N9 1602 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Znf521Q6KAS7 1311 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Sipa1l2Q80TE4 1722 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ncoa4Q5U4H9 625 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Pip4k2bQ80XI4 416 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Parp14Q2EMV9 1817 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Ncapd2Q8K2Z4 1392 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Camta1A2A891 1682 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Phlpp1Q8CHE4 1687 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Atf3Q60765 181 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Tmem132eQ6IEE6 982 aa16.34■□□□□ 0.21
Nup98-201ENSMUST00000070165 Rapgef3Q8VCC8 918 aa16.33■□□□□ 0.21
Nup98-201ENSMUST00000070165 Kcnh5Q920E3 988 aa16.33■□□□□ 0.21
Nup98-201ENSMUST00000070165 Vamp4O70480 141 aa16.33■□□□□ 0.2
Nup98-201ENSMUST00000070165 Duxf3A0A0N4SV92 674 aa16.33■□□□□ 0.2
Nup98-201ENSMUST00000070165 Smc5Q8CG46 1101 aaKnown RBP16.33■□□□□ 0.2
Nup98-201ENSMUST00000070165 Plekhm2Q80TQ5 1018 aa16.32■□□□□ 0.2
Nup98-201ENSMUST00000070165 Farp2Q91VS8 1065 aa16.32■□□□□ 0.2
Nup98-201ENSMUST00000070165 1700019A02RikA0A087WPV9 146 aa16.32■□□□□ 0.2
Nup98-201ENSMUST00000070165 Nectin2P32507 530 aa16.32■□□□□ 0.2
Nup98-201ENSMUST00000070165 Scn7aB1AYL1 1681 aa16.32■□□□□ 0.2
Nup98-201ENSMUST00000070165 HypkQ9CR41 129 aa16.31■□□□□ 0.2
Nup98-201ENSMUST00000070165 Zmym3Q9JLM4 1370 aa16.31■□□□□ 0.2
Nup98-201ENSMUST00000070165 Fmnl2A2APV2 1086 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 Pak3Q61036 559 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 Klhdc4Q921I2 584 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 Kcna6Q61923 529 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 GnpatP98192 678 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 Gsdma3Q5Y4Y6 464 aa16.3■□□□□ 0.2
Nup98-201ENSMUST00000070165 Maco1Q7TQE6 664 aaKnown RBP16.29■□□□□ 0.2
Nup98-201ENSMUST00000070165 Ppp1r3fQ9JIG4 799 aa16.29■□□□□ 0.2
Nup98-201ENSMUST00000070165 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.29■□□□□ 0.2
Nup98-201ENSMUST00000070165 Armcx1Q9CX83 456 aa16.29■□□□□ 0.2
Nup98-201ENSMUST00000070165 KarsQ99MN1 595 aaKnown RBP16.28■□□□□ 0.2
Nup98-201ENSMUST00000070165 Ggnbp2Q5SV77 696 aa16.27■□□□□ 0.2
Nup98-201ENSMUST00000070165 Aldh1l1Q8R0Y6 902 aa16.27■□□□□ 0.2
Nup98-201ENSMUST00000070165 Pibf1E9Q6K3 756 aa16.27■□□□□ 0.2
Nup98-201ENSMUST00000070165 Nutm1Q8BHP2 1126 aa16.27■□□□□ 0.2
Nup98-201ENSMUST00000070165 Dnajc10Q9DC23 793 aa16.27■□□□□ 0.2
Nup98-201ENSMUST00000070165 Nsd3Q6P2L6 1439 aa16.27■□□□□ 0.19
Nup98-201ENSMUST00000070165 Q3UPC7 1272 aa16.26■□□□□ 0.19
Nup98-201ENSMUST00000070165 Chmp4bQ9D8B3 224 aaKnown RBP16.25■□□□□ 0.19
Nup98-201ENSMUST00000070165 Cavin2Q63918 418 aaKnown RBP16.25■□□□□ 0.19
Nup98-201ENSMUST00000070165 Dzip1Q8BMD2 852 aa16.25■□□□□ 0.19
Nup98-201ENSMUST00000070165 Rlbp1Q9Z275 317 aa16.24■□□□□ 0.19
Nup98-201ENSMUST00000070165 Slit2Q9R1B9 1521 aa16.24■□□□□ 0.19
Nup98-201ENSMUST00000070165 Ptpn23Q6PB44 1692 aa16.24■□□□□ 0.19
Nup98-201ENSMUST00000070165 Cluap1Q8R3P7 413 aa16.23■□□□□ 0.19
Nup98-201ENSMUST00000070165 Dixdc1Q80Y83 711 aa16.23■□□□□ 0.19
Nup98-201ENSMUST00000070165 PtprvP70289 1705 aa16.23■□□□□ 0.19
Nup98-201ENSMUST00000070165 Amotl2Q8K371 772 aa16.23■□□□□ 0.19
Nup98-201ENSMUST00000070165 Snap23O09044 210 aa16.22■□□□□ 0.19
Nup98-201ENSMUST00000070165 Prim1P20664 417 aa16.22■□□□□ 0.19
Nup98-201ENSMUST00000070165 Rtl5Q5DTT4 599 aa16.22■□□□□ 0.19
Nup98-201ENSMUST00000070165 Ric3Q8BPM6 367 aa16.22■□□□□ 0.19
Nup98-201ENSMUST00000070165 Kdm6aO70546 1401 aa16.21■□□□□ 0.19
Nup98-201ENSMUST00000070165 MvpQ9EQK5 861 aa16.21■□□□□ 0.19
Nup98-201ENSMUST00000070165 Q3TQI7 289 aaKnown RBP16.2■□□□□ 0.18
Nup98-201ENSMUST00000070165 Atl3Q91YH5 541 aa16.2■□□□□ 0.18
Nup98-201ENSMUST00000070165 Nfat5Q9WV30 1534 aa16.2■□□□□ 0.18
Nup98-201ENSMUST00000070165 Scn4aQ9ER60 1841 aa16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Ddx17Q501J6 650 aaKnown RBP16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Amotl1Q9D4H4 968 aa16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Trim30dE9PWL0 497 aa16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Nol11Q8BJW5 723 aaKnown RBP16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Egfem1Q8C088 590 aa16.19■□□□□ 0.18
Nup98-201ENSMUST00000070165 Gm21698A0A087WQP8 267 aa16.18■□□□□ 0.18
Nup98-201ENSMUST00000070165 Gm21671G3UY31 267 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms