RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 D430041D05RikF6ZGR6 1678 aa16.12■□□□□ 0.17
Rnf4-201ENSMUST00000030992 CemipQ8BI06 1361 aa16.11■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Mcm10Q0VBD2 885 aa16.11■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Tet3Q8BG87 1668 aa16.11■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Ubr1O70481 1757 aa16.11■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Cabp2Q9JLK4 216 aa16.1■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Pik3c2aQ61194 1686 aa16.1■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Kif20bQ80WE4 1774 aaKnown RBP16.1■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Mon2Q80TL7 1715 aa16.1■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Rims2Q9EQZ7 1530 aa16.1■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Eif4a2P10630 407 aa16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Cavin2Q63918 418 aaKnown RBP16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Sos1Q62245 1319 aa16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 MvpQ9EQK5 861 aa16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Gm6268A2A3U9 297 aa16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Nectin2P32507 530 aa16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Ccdc9Q8VC31 543 aaKnown RBP16.09■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Q3UJC8 639 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Nutm1Q8BHP2 1126 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Als2Q920R0 1651 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Cdk12Q14AX6 1484 aaKnown RBP16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Adgrb1Q3UHD1 1582 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Ankrd44B2RXR6 993 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 SkilQ60665 675 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 C5P06684 1680 aa16.08■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Abcc10Q8R4P9 1501 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Col16a1Q8BLX7 1580 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Scn7aB1AYL1 1681 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 MarsQ68FL6 902 aaKnown RBP16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Slit2Q9R1B9 1521 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Sptbn5F6UCX4 1208 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Ecm2Q5FW85 670 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Tmco5bQ80X59 307 aa16.07■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Brd1E9PZ26 1189 aaKnown RBP16.06■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Map2P20357 1828 aa16.06■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Pdlim2Q8R1G6 349 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Rabep1O35551 862 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Map7O88735 730 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Wwc1Q5SXA9 1104 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Kif18aQ91WD7 886 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Usp16Q99LG0 825 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Lmtk3Q5XJV6 1424 aa16.05■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Camta1A2A891 1682 aa16.04■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Rangap1P46061 589 aaKnown RBP16.04■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Stk31Q99MW1 1018 aa16.03■□□□□ 0.16
Rnf4-201ENSMUST00000030992 4930407I10RikD3Z5T8 1512 aa16.03■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Chmp4bQ9D8B3 224 aaKnown RBP16.03■□□□□ 0.16
Rnf4-201ENSMUST00000030992 Klhdc4Q921I2 584 aa16.02■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Kif2cQ922S8 721 aa16.02■□□□□ 0.15
Rnf4-201ENSMUST00000030992 MpripP97434 1024 aa16.01■□□□□ 0.15
Rnf4-201ENSMUST00000030992 LifrP42703 1092 aa16.01■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Tnpo1Q8BFY9 898 aaKnown RBP16.01■□□□□ 0.15
Rnf4-201ENSMUST00000030992 PtprvP70289 1705 aa16.01■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Ptpn23Q6PB44 1692 aa16■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Kif24Q6NWW5 1356 aa16■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Trpm3Q5F4S9 1721 aa16■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Parp14Q2EMV9 1817 aa15.99■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Chl1P70232 1209 aa15.99■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Cog6Q8R3I3 657 aa15.99■□□□□ 0.15
Rnf4-201ENSMUST00000030992 U2surpQ6NV83 1029 aaKnown RBP15.98■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Cetn4Q8K4K1 168 aa15.98■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Aldh1l2Q8K009 923 aa15.98■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Mfap1aC0HKD8 439 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Mfap1bC0HKD9 439 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Idi1P58044 227 aa15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Safb2Q80YR5 991 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Senp3Q9EP97 568 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 DaxxO35613 739 aa15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 DiexfQ8BTT6 772 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Plin1Q8CGN5 517 aa15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Trim27Q62158 513 aa15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 KnstrnQ9D9Z1 312 aaKnown RBP15.97■□□□□ 0.15
Rnf4-201ENSMUST00000030992 FancaQ9JL70 1439 aa15.96■□□□□ 0.15
Rnf4-201ENSMUST00000030992 Phf23Q8BSN5 401 aa15.96■□□□□ 0.15
Rnf4-201ENSMUST00000030992 TmpoQ61033 693 aaKnown RBP15.96■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Ric3Q8BPM6 367 aa15.96■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Bcl9Q9D219 1425 aa15.96■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Wdr63B2RY71 923 aa15.95■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Nlgn1Q99K10 843 aa15.95■□□□□ 0.14
Rnf4-201ENSMUST00000030992 CarsQ9ER72 831 aaKnown RBP15.94■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Aplp1Q03157 653 aa15.94■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Zfp777B9EKF4 885 aa15.93■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Dennd6aQ8BH65 605 aa15.93■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Aifm3Q3TY86 605 aa15.93■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Rad17Q6NXW6 688 aa15.93■□□□□ 0.14
Rnf4-201ENSMUST00000030992 NgefQ8CHT1 710 aa15.93■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Tm6sf1P58749 370 aa15.92■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Htatsf1Q8BGC0 757 aa15.92■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Aldh8a1Q8BH00 487 aa15.92■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Rab11fip3Q8CHD8 1047 aa15.92■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Eya1P97767 591 aa15.91■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Frmpd2A0A140LI67 1392 aa15.91■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Gm10563F6WIE4 79 aa15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 ArxO35085 564 aa15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Antxr1Q9CZ52 562 aa15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Msh6P54276 1358 aaKnown RBP15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Nckap5lQ6GQX2 1323 aa15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Gm10093D3YYI8 482 aa15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Hdac1O09106 482 aaKnown RBP15.9■□□□□ 0.14
Rnf4-201ENSMUST00000030992 Igsf1Q7TQA1 1317 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 76.6 ms