RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 CrklP47941 303 aa28.16■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 OptnQ8K3K8 584 aa28.16■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Ginm1Q91WR6 327 aa28.16■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 CemipQ8BI06 1361 aa28.15■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Slit1Q80TR4 1531 aa28.14■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Erbb3Q61526 1339 aa28.13■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Snapc4Q8BP86 1333 aa28.13■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Tmem132eQ6IEE6 982 aa28.12■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Scn7aB1AYL1 1681 aa28.11■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Sik1Q60670 779 aa28.11■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 PsdQ5DTT2 1024 aa28.1■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Map2P20357 1828 aa28.09■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Plekhd1B2RPU2 505 aa28.09■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Zpr1Q62384 459 aa28.09■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 FocadA2AKG8 1798 aa28.09■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Exoc5Q3TPX4 708 aa28.08■■■□□ 2.09
Ttc39b-201ENSMUST00000030205 Scaf1Q5U4C3 1256 aaKnown RBP28.07■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Ppargc1bQ8VHJ7 1014 aa28.05■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Bsdc1Q80Y55 427 aa28.04■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 En2P09066 324 aa28.03■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Prdm10Q3UTQ7 1184 aa28.03■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Arhgap33Q80YF9 1305 aa28.02■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Fam184bQ0KK56 942 aa28.02■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Pim2Q62070 370 aa28.02■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Gpr150Q8BL07 427 aa28.02■■■□□ 2.08
Ttc39b-201ENSMUST00000030205 Nsd3Q6P2L6 1439 aa28.01■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Kcnh4A2A5F7 1018 aa28■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Zranb3Q6NZP1 1069 aa28■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Pnpla7A2AJ88 1352 aa27.99■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Ccdc85cE9Q6B2 420 aa27.99■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Magea1O89006 320 aa27.99■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Magea5O89009 320 aa27.99■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Magea2Q9R2A2 320 aa27.99■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Hoxc9P09633 260 aa27.97■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 Afg3l2Q8JZQ2 802 aaKnown RBP27.97■■■□□ 2.07
Ttc39b-201ENSMUST00000030205 TkfcQ8VC30 578 aa27.95■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Col15a1O35206 1367 aa27.95■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Rpgrip1Q9EPQ2 1331 aa27.93■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Kcna3P16390 528 aa27.93■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Cc2d1aQ8K1A6 943 aa27.93■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Slc4a1apE9PX68 744 aa27.92■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Arfgef2A2A5R2 1792 aa27.91■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Ptpn23Q6PB44 1692 aa27.91■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Birc3O08863 600 aa27.9■■■□□ 2.06
Ttc39b-201ENSMUST00000030205 Elp1Q7TT37 1333 aaKnown RBP27.87■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Gm10471E9Q1C7 252 aa27.86■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Q8BT18 775 aa27.86■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Adgrb1Q3UHD1 1582 aa27.85■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Ahnak2E9PYB0 1738 aaKnown RBP27.84■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Ciz1Q8VEH2 845 aa27.84■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Slc24a1Q91WD8 1130 aa27.84■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Kif23E9Q5G3 953 aa27.83■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Ccne1Q61457 408 aa27.83■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Sos2Q02384 1333 aa27.83■■■□□ 2.05
Ttc39b-201ENSMUST00000030205 Ankrd13dQ6PD24 605 aa27.82■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Fam50bQ9WTJ8 334 aa27.82■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Hoxb7P09024 217 aa27.8■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Ubxn2bQ0KL01 331 aa27.8■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Kcnq2Q9Z351 759 aa27.8■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Akt1s1Q9D1F4 257 aa27.79■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Smg6P61406 1418 aaKnown RBP27.77■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Gm21680A0A0G2JGR8 267 aa27.77■■■□□ 2.04
Ttc39b-201ENSMUST00000030205 Rad17Q6NXW6 688 aa27.76■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 AtrnQ9WU60 1428 aa27.75■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Trpc5Q9QX29 975 aa27.75■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 IbtkQ6ZPR6 1352 aaKnown RBP27.74■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Fam198bQ3UPI1 517 aa27.74■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Cwc22Q8C5N3 908 aaKnown RBP27.73■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Rps6ka4Q9Z2B9 773 aa27.73■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Abca3Q8R420 1704 aa27.72■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Speer4bQ9D9F7 267 aa27.71■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Simc1E9Q6E9 1354 aa27.71■■■□□ 2.03
Ttc39b-201ENSMUST00000030205 Kiaa0319lQ8K135 1048 aa27.69■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Aplp2Q06335 707 aa27.67■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Ppp1r37Q8BKR5 712 aa27.66■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Parp14Q2EMV9 1817 aa27.65■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Hmgb2P30681 210 aaKnown RBP27.65■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 ThemisQ8BGW0 636 aa27.65■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 4930572O03RikQ8C5Y0 211 aa27.65■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Kdm6aO70546 1401 aa27.65■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 Shank3Q4ACU6 1730 aa27.64■■■□□ 2.02
Ttc39b-201ENSMUST00000030205 PrxO55103 1391 aa27.63■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Dcaf11Q91VU6 549 aa27.62■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 IncenpQ9WU62 880 aa27.62■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Tmf1B9EKI3 1091 aa27.61■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Larp1Q6ZQ58 1072 aaKnown RBP27.61■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Pank3Q8R2W9 370 aa27.61■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Emilin1Q99K41 1017 aa27.61■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Fchsd2Q3USJ8 740 aa27.6■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Sin3aQ60520 1274 aaKnown RBP27.6■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Klc3Q91W40 508 aa27.59■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 ApobrQ8VBT6 942 aa27.58■■■□□ 2.01
Ttc39b-201ENSMUST00000030205 Eya1P97767 591 aa27.57■■■□□ 2
Ttc39b-201ENSMUST00000030205 Slc34a2Q9DBP0 697 aa27.57■■■□□ 2
Ttc39b-201ENSMUST00000030205 Inpp5dQ9ES52 1191 aa27.57■■■□□ 2
Ttc39b-201ENSMUST00000030205 Ppef1O35655 650 aa27.54■■■□□ 2
Ttc39b-201ENSMUST00000030205 ErfeQ6PGN1 340 aa27.54■■■□□ 2
Ttc39b-201ENSMUST00000030205 Hirip3Q8BLH7 601 aa27.54■■■□□ 2
Ttc39b-201ENSMUST00000030205 Igsf1Q7TQA1 1317 aa27.53■■■□□ 2
Ttc39b-201ENSMUST00000030205 Rad23bP54728 416 aa27.53■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms