RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 CemipQ8BI06 1361 aa25.71■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Plin1Q8CGN5 517 aa25.7■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Gtf2a1Q99PM3 378 aa25.7■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Topaz1E5FYH1 1653 aa25.7■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Tmem94Q7TSH8 1360 aa25.7■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Rlbp1Q9Z275 317 aa25.7■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Cdk12Q14AX6 1484 aaKnown RBP25.69■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Ubr1O70481 1757 aa25.69■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Cdc37l1Q9CZP7 335 aa25.69■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Rims2Q9EQZ7 1530 aa25.68■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Ccdc171E9Q1U1 1324 aa25.68■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Rangap1P46061 589 aaKnown RBP25.68■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 MpripP97434 1024 aa25.68■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Map2P20357 1828 aa25.68■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Col16a1Q8BLX7 1580 aa25.67■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Zfp777B9EKF4 885 aa25.66■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Ap3b2Q9JME5 1082 aa25.66■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 G3bp1P97855 465 aaKnown RBP25.65■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Gm6268A2A3U9 297 aa25.64■■□□□ 1.7
Ctdsp1-201ENSMUST00000027367 Gnai1B2RSH2 354 aa25.63■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Dennd6aQ8BH65 605 aa25.63■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Gnai3Q9DC51 354 aa25.63■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Stk31Q99MW1 1018 aa25.63■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Senp3Q9EP97 568 aaKnown RBP25.63■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Rtn4Q99P72 1162 aaKnown RBP25.62■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Frmpd2A0A140LI67 1392 aa25.62■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Camta1A2A891 1682 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Scn7aB1AYL1 1681 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Znf330Q922H9 316 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Parp14Q2EMV9 1817 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 C3P01027 1663 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Nlgn1Q99K10 843 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 FancaQ9JL70 1439 aa25.61■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Armcx1Q9CX83 456 aa25.6■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Gm21190A0A0G2JGJ6 266 aa25.59■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Cabp4Q8VHC5 271 aa25.59■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Vamp4O70480 141 aa25.58■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 MlecQ6ZQI3 291 aaKnown RBP25.58■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Maco1Q7TQE6 664 aaKnown RBP25.58■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Nckap5lQ6GQX2 1323 aa25.58■■□□□ 1.69
Ctdsp1-201ENSMUST00000027367 Nectin2P32507 530 aa25.57■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Plekhm2Q80TQ5 1018 aa25.57■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Tmco5bQ80X59 307 aa25.56■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Nsd3Q6P2L6 1439 aa25.56■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Usp16Q99LG0 825 aa25.55■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 U2surpQ6NV83 1029 aaKnown RBP25.54■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Slc35g1Q8BY79 368 aa25.54■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Klhdc4Q921I2 584 aa25.54■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Col14a1Q80X19 1797 aa25.54■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Tns3Q5SSZ5 1440 aa25.53■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Nutm1Q8BHP2 1126 aa25.53■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 DmtnQ9WV69 405 aa25.53■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Thsd7aQ69ZU6 1645 aa25.53■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Rrp9Q91WM3 475 aaKnown RBP25.52■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 Rimbp3Q3V0F0 1606 aa25.52■■□□□ 1.68
Ctdsp1-201ENSMUST00000027367 PtprvP70289 1705 aa25.51■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Sos1Q62245 1319 aa25.5■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Sipa1l2Q80TE4 1722 aa25.5■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 TmpoQ61033 693 aaKnown RBP25.5■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Q3UPC7 1272 aa25.5■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Cluap1Q8R3P7 413 aa25.5■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 AU015836B2RUM3 263 aa25.49■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 KarsQ99MN1 595 aaKnown RBP25.49■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Eya1P97767 591 aa25.48■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Aldh1l1Q8R0Y6 902 aa25.48■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Nkx1-2P42580 305 aa25.48■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 4930567H17RikQ3V0K5 233 aa25.47■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Trim30dE9PWL0 497 aa25.47■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Slit2Q9R1B9 1521 aa25.47■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Ccne1Q61457 408 aa25.46■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Taok2Q6ZQ29 1240 aa25.46■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Alpk3Q924C5 1678 aa25.46■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Dnttip2Q8R2M2 758 aaKnown RBP25.46■■□□□ 1.67
Ctdsp1-201ENSMUST00000027367 Tmem2Q5FWI3 1383 aa25.44■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Hoxc9P09633 260 aa25.44■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Ptpn23Q6PB44 1692 aa25.44■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 AU019823E9PUQ3 292 aa25.43■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Znf692Q3U381 531 aa25.43■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Pdlim2Q8R1G6 349 aa25.43■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Atl3Q91YH5 541 aa25.43■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 CanxP35564 591 aaKnown RBP25.42■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Dnajc5P60904 198 aa25.41■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Cavin2Q63918 418 aaKnown RBP25.41■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Sart3Q9JLI8 962 aaKnown RBP25.41■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 1700019A02RikA0A087WPV9 146 aa25.4■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Tmem132eQ6IEE6 982 aa25.4■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Unc13bQ9Z1N9 1602 aa25.4■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Tet3Q8BG87 1668 aa25.4■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 MvpQ9EQK5 861 aa25.4■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Ggnbp2Q5SV77 696 aa25.39■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Ak7Q9D2H2 614 aa25.39■■□□□ 1.66
Ctdsp1-201ENSMUST00000027367 Ccdc183A2AJB1 534 aa25.39■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Ppp2r3aB2RXC8 1150 aa25.39■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Rad17Q6NXW6 688 aa25.39■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Ano8Q6PB70 1060 aa25.38■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Snap23O09044 210 aa25.38■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Mre11Q61216 706 aa25.38■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Ncapd2Q8K2Z4 1392 aa25.37■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Rtf1A2AQ19 715 aaKnown RBP25.37■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 MarsQ68FL6 902 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms