RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Q3UPC7 1272 aa14.7□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Pnma3Q8JZW8 466 aa14.7□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Pola1P33609 1465 aa14.7□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Cdk19Q8BWD8 501 aa14.7□□□□□ -0.06
Ercc4-201ENSMUST00000023206 U2af2P26369 475 aaKnown RBP14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Atp2b3Q0VF55 1220 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Gsto1O09131 240 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Kiaa0753Q6A000 959 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Plekhm2Q80TQ5 1018 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Tomm22Q9CPQ3 142 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Swt1Q9DBQ9 907 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Nphp4P59240 1425 aa14.69□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Smarca5Q91ZW3 1051 aaKnown RBP14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Hecw1Q8K4P8 1604 aa14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Trim30aP15533 496 aa14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Cdc37l1Q9CZP7 335 aa14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Cul9Q80TT8 1865 aa14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Clasp1Q80TV8 1535 aaKnown RBP14.68□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Rbm42Q91V81 474 aaKnown RBP14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Ccdc94Q9D6J3 314 aa14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Phactr2B1AVP0 632 aa14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Fam114a1Q9D281 569 aa14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 PtprtQ99M80 1454 aa14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Gripap1Q8VD04 806 aa14.67□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Fam135bQ9DAI6 1403 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 NinlQ6ZQ12 1394 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Kcnj4P52189 445 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Isy1Q69ZQ2 285 aaKnown RBP14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Kank4Q6P9J5 1016 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 NcapgE9PWG6 1004 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Naa30Q8CES0 364 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 KdrP35918 1367 aa14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Xrn1P97789 1719 aaKnown RBP14.66□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Mindy4Q3UQI9 744 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Ric3Q8BPM6 367 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Mkrn3Q60764 544 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Polr3gQ6NXY9 223 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Casc1Q6TDU8 730 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Tnnt1O88346 262 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Stac3Q8BZ71 360 aa14.65□□□□□ -0.06
Ercc4-201ENSMUST00000023206 Kiaa1210E9Q0C6 1637 aa14.64□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Utp3Q9JI13 469 aaKnown RBP14.64□□□□□ -0.07
Ercc4-201ENSMUST00000023206 CatipB9EKE5 520 aa14.64□□□□□ -0.07
Ercc4-201ENSMUST00000023206 MpripP97434 1024 aa14.64□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Asxl2Q8BZ32 1370 aa14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Gm10093D3YYI8 482 aa14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Hdac1O09106 482 aaKnown RBP14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Nos1Q9Z0J4 1429 aa14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 CarsQ9ER72 831 aaKnown RBP14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Itsn2Q9Z0R6 1659 aa14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Zfyve16Q80U44 1528 aa14.63□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Wdr78E9PYY5 807 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Brd1E9PZ26 1189 aaKnown RBP14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Sox12Q04890 314 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Zpr1Q62384 459 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Zbtb22Q9Z0G7 638 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Lrrc7Q80TE7 1490 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Ankrd50F7BE84 1390 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Abca6Q8K441 1624 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Ptch1Q61115 1434 aa14.62□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Myom2Q14BI5 1463 aa14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Ptgs1P22437 602 aa14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Aifm3Q3TY86 605 aa14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Kif4P33174 1231 aa14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Zkscan1Q8BGS3 561 aaKnown RBP14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Gprasp1Q5U4C1 1347 aa14.61□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Wdr63B2RY71 923 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Eif4g2Q62448 906 aaKnown RBP14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Ggnbp2Q5SV77 696 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 FanclQ9CR14 375 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Q9D2X8 372 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 MvpQ9EQK5 861 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 AnkarA2RT91 1465 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Mcm3P25206 812 aaKnown RBP14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Aldh1l1Q8R0Y6 902 aa14.6□□□□□ -0.07
Ercc4-201ENSMUST00000023206 InsrP15208 1372 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Sh3bp1P55194 680 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 PalldQ9ET54 1408 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Nxf2Q4ZGD8 691 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Tshz2Q68FE9 1030 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Tmx1Q8VBT0 278 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Abca17E9PX95 1733 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Uggt2E9Q4X2 1504 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Zmym3Q9JLM4 1370 aa14.59□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Hsp90b1P08113 802 aaKnown RBP14.58□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Afap1Q80YS6 731 aa14.58□□□□□ -0.07
Ercc4-201ENSMUST00000023206 Nsd3Q6P2L6 1439 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Ccdc171E9Q1U1 1324 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 AcrbpQ3V140 540 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Cep152A2AUM9 1736 aaKnown RBP14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Abca9Q8K449 1623 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Vamp4O70480 141 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 CebpzP53569 1052 aaKnown RBP14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Tshz3Q8CGV9 1081 aa14.58□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Tpd52l1O54818 204 aa14.57□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Pdcl2Q78Y63 240 aa14.57□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Grpel1Q99LP6 217 aa14.57□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Myo5cE9Q1F5 1742 aa14.57□□□□□ -0.08
Ercc4-201ENSMUST00000023206 Irx2P81066 474 aa14.57□□□□□ -0.08
Ercc4-201ENSMUST00000023206 EappQ5BU09 281 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms