RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 B9A039 149 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 F5H0A9 414 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 BOLA2-SMG1P6H3BVE0 249 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 M0QZQ0 153 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 SNAP23O00161 211 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 PSMD14O00487 310 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 RNF8O76064 485 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 APEHP13798 732 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CPA1P15085 419 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CNTFP26441 200 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 ATP6V1E1P36543 226 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 AGTR2P50052 363 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CCT4P50991 539 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 HSD17B7P56937 341 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 RPL15P61313 204 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TNIP1Q15025 636 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CCDC142Q17RM4 750 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 RABL6Q3YEC7 729 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TRIM60Q495X7 471 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TMEM119Q4V9L6 283 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 IRGCQ6NXR0 463 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 C16orf89Q6UX73 402 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 USP50Q70EL3 339 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TEX11Q8IYF3 940 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TAF4BQ92750 862 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 JAKMIP2Q96AA8 810 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TSGA13Q96PP4 275 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 PIGSQ96S52 555 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 EYA3Q99504 573 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 BARD1Q99728 777 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 ADPGKQ9BRR6 497 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 THAP7Q9BT49 309 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 USP44Q9H0E7 712 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 RIOX1Q9H6W3 641 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 ADARB2Q9NS39 739 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 RXFP3Q9NSD7 469 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 ASNSD1Q9NWL6 643 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TRMT1Q9NXH9 659 aaKnown RBP4.34□□□□□ -1.71
LRRC28-222ENST00000561431 PCSK1NQ9UHG2 260 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 PRDM4Q9UKN5 801 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 FZD4Q9ULV1 537 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 TNNQ9UQP3 1299 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 DERAQ9Y315 318 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 ZBED9Q6R2W3 1325 aa4.34□□□□□ -1.71
LRRC28-222ENST00000561431 CNTNAP1P78357 1384 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF804BA4D1E1 1349 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ASTN2O75129 1339 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 KIF16BQ96L93 1317 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 C3orf70A6NLC5 250 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 BTBD19C9JJ37 291 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TMEM232C9JQI7 657 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 POC1B-GALNT4F8VUJ3 575 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 H7C0S8 307 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 H7C1Q1 480 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 RTCAO00442 366 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 B3GALNT1O75752 331 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 FAM155BO75949 473 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 NUDT3O95989 172 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TK1P04183 234 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 SFTPCP11686 197 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 STMN1P16949 149 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 XBP1P17861 261 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 RPS12P25398 132 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 RFX5P48382 616 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 MCM2P49736 904 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 RCAN1P53805 252 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TAS2R50P59544 299 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TLE3Q04726 772 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 CHRNDQ07001 517 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ANKRD1Q15327 319 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 KYAT3Q6YP21 454 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 C15orf52Q6ZUT6 534 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 CNTROBQ8N137 903 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 GALNT4Q8N4A0 578 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ADPRHL1Q8NDY3 354 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ARHGAP45Q92619 1136 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 SDCCAG3Q96C92 435 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF764Q96H86 408 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TIMP4Q99727 224 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 BAG1Q99933 345 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 CHCHD6Q9BRQ6 235 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 MXD3Q9BW11 206 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 PUS3Q9BZE2 481 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 ANKRD2Q9GZV1 360 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 TRPV4Q9HBA0 871 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 KCNK9Q9NPC2 374 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 PLSCR4Q9NRQ2 329 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 CTNNA3Q9UI47 895 aa4.33□□□□□ -1.72
LRRC28-222ENST00000561431 CNOT7Q9UIV1 285 aaKnown RBP4.33□□□□□ -1.72
LRRC28-222ENST00000561431 COL1A1P02452 1464 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GXYLT2A0PJZ3 443 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 FSD2A1L4K1 749 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms