RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KCNJ13O60928 360 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GLRA3O75311 464 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 PTTG1O95997 202 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GSTM1P09488 218 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 QARSP47897 775 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 SERPINH1P50454 418 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 MS4A2Q01362 244 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GALK2Q01415 458 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CLCQ05315 142 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ALCAMQ13740 583 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 TAF5Q15542 800 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 SLC9A4Q6AI14 798 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 BTLAQ7Z6A9 289 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 SCML4Q8N228 414 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 LINC00469Q8N7U9 141 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ZSCAN5AQ9BUG6 496 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CFL2Q9Y281 166 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 HEATR9A2RTY3 570 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 NFIBO00712 420 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 KRT20P35900 424 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GRIA3P42263 894 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CDC42EP1Q00587 391 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 FAM205BPQ63HN1 556 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 SDE2Q6IQ49 451 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 KCTD20Q7Z5Y7 419 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 SNX29P2Q8IUI4 249 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CADM2Q8N3J6 435 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CBR4Q8N4T8 237 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GLIS1Q8NBF1 620 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ZFP90Q8TF47 636 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CNDP1Q96KN2 507 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 PTPN18Q99952 460 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 JPH1Q9HDC5 661 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 PCSK1NQ9UHG2 260 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 CNOT6Q9ULM6 557 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 GABRQQ9UN88 632 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
CLSTN3-207ENST00000537408 PAPSS1O43252 624 aaPredicted RBP10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 AVILO75366 819 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 CPNE6O95741 557 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 NCAM1P13591 858 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 JUNBP17275 347 aaPredicted RBP10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 HTR2BP41595 481 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 CNTN2Q02246 1040 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 INPP5AQ14642 412 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 CHSY3Q70JA7 882 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 SNX19Q92543 992 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 PROX1Q92786 737 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 GPRASP2Q96D09 838 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 HDAC11Q96DB2 347 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 LXNQ9BS40 222 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 RUSC1Q9BVN2 902 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 IFT80Q9P2H3 777 aaPredicted RBP10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 GABBR1Q9UBS5 961 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 PAPPA2Q9BXP8 1791 aa10.96□□□□□ -0.66
CLSTN3-207ENST00000537408 C17orf102A2RUQ5 167 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 FAM25EA8MYX2 175 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 TOR1BO14657 336 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 SEC14L2O76054 403 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 OR7A10O76100 309 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 C7P10643 843 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 CKMT2P17540 419 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PROZP22891 400 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 GRK3P35626 688 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 CAPGP40121 348 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PPP5CP53041 499 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ABCE1P61221 599 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 FMO1Q01740 532 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PPIGQ13427 754 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■□□□ 11.9
CLSTN3-207ENST00000537408 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 SWSAP1Q6NVH7 229 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 GATAD2AQ86YP4 633 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ANKRD53Q8N9V6 530 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 FARSBQ9NSD9 589 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 IRS2Q9Y4H2 1338 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PI4K2BG5E9Z4 385 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 YES1P07947 543 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 KRT19P08727 400 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 STAT5BP51692 787 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 BMPR2Q13873 1038 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 RFTN1Q14699 578 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 POLNQ7Z5Q5 900 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PTAR1Q7Z6K3 402 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 CLYBLQ8N0X4 340 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ZNF302Q9NR11 478 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 BAG5Q9UL15 447 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 E7ESA3 106 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 hCG_2039718K7EN88 272 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 CD40LGP29965 261 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 RACK1P63244 317 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 TRAP1Q12931 704 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC13A2Q13183 592 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms