RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ATP13A4Q4VNC1 1196 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 HES3Q5TGS1 186 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 SRLQ86TD4 932 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 ZNF548Q8NEK5 533 aaPredicted RBP17.98■□□□□ 0.47
SMG1-203ENST00000532700 CSPG4P5Q96PW8 444 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 PCDH18Q9HCL0 1135 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 LAMA5O15230 3695 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 GOLGA4Q13439 2230 aaKnown RBP17.98■□□□□ 0.47
SMG1-203ENST00000532700 CHD6Q8TD26 2715 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 PALMO75781 387 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 NME1P15531 152 aaKnown RBP17.97■□□□□ 0.47
SMG1-203ENST00000532700 CKMT2P17540 419 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 IL4RP24394 825 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 EIF4A3P38919 411 aaKnown RBP17.97■□□□□ 0.47
SMG1-203ENST00000532700 MMP12P39900 470 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 HCAR3P49019 387 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 SGCGQ13326 291 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 TMEM52BQ4KMG9 183 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 FAM182AQ5T1J6 154 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 PELI3Q8N2H9 469 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 NIPA2Q8N8Q9 360 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 ASB12Q8WXK4 309 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 TRIM11Q96F44 468 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 NCAPGQ9BPX3 1015 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 SUV39H2Q9H5I1 410 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 SP110Q9HB58 689 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 IPO11Q9UI26 975 aaKnown RBP17.97■□□□□ 0.47
SMG1-203ENST00000532700 RAXQ9Y2V3 346 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 PCDHGA1Q9Y5H4 931 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMG1-203ENST00000532700 ADAMTS20P59510 1910 aa17.97■□□□□ 0.47
SMG1-203ENST00000532700 EIF3CLB5ME19 914 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 TRAFD1O14545 582 aaPredicted RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 FPGTO14772 594 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 GCATO75600 419 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 CSF2P04141 144 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 C6P13671 934 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 ACP1P24666 158 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 INSM1Q01101 510 aaPredicted RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 CYP4F3Q08477 520 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 ZNF211Q13398 564 aaPredicted RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 TCEA2Q15560 299 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 UGP2Q16851 508 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 WSCD2Q2TBF2 565 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 CCDC122Q5T0U0 273 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 ALKBH5Q6P6C2 394 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 PARGQ86W56 976 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 PSTKQ8IV42 348 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 DENND6BQ8NEG7 585 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 LRRN4Q8WUT4 740 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 APOLD1Q96LR9 279 aa17.96■□□□□ 0.47
SMG1-203ENST00000532700 EIF3CQ99613 913 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 MRPL47Q9HD33 250 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
SMG1-203ENST00000532700 A8MX80 341 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 K7ESM1 405 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 SCAMP1O15126 338 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 TM7SF2O76062 418 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 DESP17661 470 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 RABIFP47224 123 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 ARSEP51690 589 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 TAS2R40P59535 323 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 RAD51Q06609 339 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 IL10RBQ08334 325 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 TARDBPQ13148 414 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMG1-203ENST00000532700 C1orf61Q13536 156 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 IHHQ14623 411 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 ASTE1Q2TB18 679 aaPredicted RBP17.95■□□□□ 0.46
SMG1-203ENST00000532700 GALNT15Q8N3T1 639 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 PLA2G15Q8NCC3 412 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 CXorf40AQ8TE69 158 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 ECHDC3Q96DC8 303 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 CINPQ9BW66 212 aaPredicted RBP17.95■□□□□ 0.46
SMG1-203ENST00000532700 CLPBQ9H078 707 aa17.95■□□□□ 0.46
SMG1-203ENST00000532700 CCDC86Q9H6F5 360 aaKnown RBP17.95■□□□□ 0.46
SMG1-203ENST00000532700 A0A0U1RQS6 177 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 H3BRJ5 948 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 MAFKO60675 156 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 MAP3K6O95382 1288 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 HNRNPH3P31942 346 aaKnown RBP17.94■□□□□ 0.46
SMG1-203ENST00000532700 GJC1P36383 396 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 CSNK1DP48730 415 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 LIG3P49916 1009 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 LBRQ14739 615 aaKnown RBP17.94■□□□□ 0.46
SMG1-203ENST00000532700 DEFB133Q30KQ1 61 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 C19orf48Q6RUI8 117 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 TMPRSS12Q86WS5 348 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 IFT43Q96FT9 208 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 SMIM14Q96QK8 99 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 LRRC61Q9BV99 259 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 NLGN3Q9NZ94 848 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 ATP8A1Q9Y2Q0 1164 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 BZW2Q9Y6E2 419 aaKnown RBP17.94■□□□□ 0.46
SMG1-203ENST00000532700 ITPR1Q14643 2758 aa17.94■□□□□ 0.46
SMG1-203ENST00000532700 MFSD11O43934 449 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 JUNDP17535 347 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 CR2P20023 1033 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 SCNN1BP51168 640 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms