RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FAM131BQ86XD5 332 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SNX29P2Q8IUI4 249 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 MFSD6LQ8IWD5 586 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 DNAAF3Q8N9W5 541 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 BPIFB6Q8NFQ5 453 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SNX19Q92543 992 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 CENPIQ92674 756 aaPredicted RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 RPL10LQ96L21 214 aaKnown RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 RPF1Q9H9Y2 349 aaKnown RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 CYP3A43Q9HB55 503 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 FANCEQ9HB96 536 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 IFT80Q9P2H3 777 aaPredicted RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 NOL3O60936 208 aaKnown RBP10.96□□□□□ -0.65
ZNF558-201ENST00000301475 RASAL1O95294 804 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 NCAM1P13591 858 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 YWHAQP27348 245 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 NMBRP28336 390 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 CAPGP40121 348 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 HLCSP50747 726 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 MPP1Q00013 466 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 PERM1Q5SV97 790 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 DEPDC1Q5TB30 811 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 SPRED1Q7Z699 444 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 CEP97Q8IW35 865 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 C17orf50Q8WW18 174 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 TSNARE1Q96NA8 513 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 C9orf16Q9BUW7 83 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 C1orf50Q9BV19 199 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 POMKQ9H5K3 350 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 ATAD3AQ9NVI7 634 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 BFARQ9NZS9 450 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 ANKRD6Q9Y2G4 727 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 ST14Q9Y5Y6 855 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 SCN1AP35498 2009 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 COL4A5P29400 1685 aa10.96□□□□□ -0.65
ZNF558-201ENST00000301475 IGKV6D-21A0A0A0MT36 114 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 SNAP29O95721 258 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 AP2A1O95782 977 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 PABPC1P11940 636 aaKnown RBP10.96□□□□□ -0.66
ZNF558-201ENST00000301475 TPH1P17752 444 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 TMBIM6P55061 237 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 BFSP2Q13515 415 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 SEPT6Q14141 434 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 C6orf183Q5T699 404 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 CYHR1Q6ZMK1 362 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 FUNDC1Q8IVP5 155 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 COLGALT2Q8IYK4 626 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 ADGRG5Q8IZF4 528 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 NLGN2Q8NFZ4 835 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 SGCDQ92629 289 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 CPB2Q96IY4 423 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 GLT1D1Q96MS3 346 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 LPIN3Q9BQK8 851 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 SLC25A23Q9BV35 468 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 MROQ9BYG7 248 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 RHOJQ9H4E5 214 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 FBRSL1Q9HCM7 1045 aaKnown RBP10.96□□□□□ -0.66
ZNF558-201ENST00000301475 CD320Q9NPF0 282 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 CASS4Q9NQ75 786 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 NME7Q9Y5B8 376 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 NUP205Q92621 2012 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 SHROOM3Q8TF72 1996 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.66
ZNF558-201ENST00000301475 NPHS1O60500 1241 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 JRKO75564 520 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 KCNA5P22460 613 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 FASP25445 335 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ELK4P28324 431 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HPCAL1P37235 193 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ARL4AP40617 200 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SLC12A1Q13621 1099 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SMYD5Q6GMV2 418 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 XAF1Q6GPH4 301 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 USP51Q70EK9 711 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ZBTB8OSQ8IWT0 167 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ARL10Q8N8L6 244 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 ABHD11Q8NFV4 315 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SLC35F5Q8WV83 523 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 HDAC10Q969S8 669 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 CENPNQ96H22 339 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SLC45A3Q96JT2 553 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 OLFM1Q99784 485 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 TUBA1CQ9BQE3 449 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 NT5C1AQ9BXI3 368 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 MINDY3Q9H8M7 445 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 MEAF6Q9HAF1 191 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 KLHL8Q9P2G9 620 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 INO80B-WBP1J3KQ70 363 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
ZNF558-201ENST00000301475 SEC14L2O76054 403 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 AQP6Q13520 282 aa10.95□□□□□ -0.66
ZNF558-201ENST00000301475 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms