RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 DRICH1Q6PGQ1 229 aaPredicted RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 ATL2Q8NHH9 583 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 SPATA22Q8NHS9 363 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 ARRDC2Q8TBH0 407 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 LRIG1Q96JA1 1093 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 TUBGCP5Q96RT8 1024 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 CPEB1Q9BZB8 566 aaKnown RBP17.64■□□□□ 0.41
NXF1-216ENST00000533499 CD93Q9NPY3 652 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 FBXO4Q9UKT5 387 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 RAI2Q9Y5P3 530 aa17.64■□□□□ 0.41
NXF1-216ENST00000533499 PRR23AA6NEV1 266 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 C5orf60A6NFR6 353 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 FAM47DPA6NHR8 397 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 MAP3K13O43283 966 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 MT-CYBP00156 380 aaPredicted RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 ZSCAN5DPP0CG00 497 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 CA4P22748 312 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 TNNT3P45378 269 aaPredicted RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 LMAN1P49257 510 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 ZBTB16Q05516 673 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 TRAF2Q12933 501 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 PPP1R7Q15435 360 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 USP39Q53GS9 565 aaKnown RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 RALGPS1Q5JS13 557 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 RASSF3Q86WH2 238 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 MAML2Q8IZL2 1156 aaPredicted RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 AADATQ8N5Z0 425 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 FAM160A2Q8N612 972 aaPredicted RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 C12orf50Q8NA57 414 aaPredicted RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 IPMKQ8NFU5 416 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 IFT43Q96FT9 208 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 IMP4Q96G21 291 aaKnown RBP17.63■□□□□ 0.41
NXF1-216ENST00000533499 NSMCE3Q96MG7 304 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 GBA3Q9H227 469 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 EBF1Q9UH73 591 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 PCDHB9Q9Y5E1 797 aa17.63■□□□□ 0.41
NXF1-216ENST00000533499 C16orf96A6NNT2 1141 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 E7EVH7 732 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 GCATO75600 419 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 KRT14P02533 472 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 PRKCGP05129 697 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 ITGB7P26010 798 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 FNTAP49354 379 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 TPMTP51580 245 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 EPHB1P54762 984 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 SKOR1P84550 965 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 WHAMMP3Q1A5X7 153 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 P3H1Q32P28 736 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 SYCP2LQ5T4T6 812 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 ARMC12Q5T9G4 340 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 ERN2Q76MJ5 926 aaKnown RBP17.62■□□□□ 0.41
NXF1-216ENST00000533499 PARS2Q7L3T8 475 aaKnown RBP17.62■□□□□ 0.41
NXF1-216ENST00000533499 TTC7BQ86TV6 843 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 FRMD1Q8N878 549 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 GLIS1Q8NBF1 620 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 GRK7Q8WTQ7 553 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 SPACA7Q96KW9 195 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 ZNF641Q96N77 438 aaPredicted RBP17.62■□□□□ 0.41
NXF1-216ENST00000533499 FCRL5Q96RD9 977 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 KRT12Q99456 494 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 NEUROG2Q9H2A3 272 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 SERGEFQ9UGK8 458 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 SCML1Q9UN30 329 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 CHKBQ9Y259 395 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 MUC3AQ02505 3323 aa17.62■□□□□ 0.41
NXF1-216ENST00000533499 CCDC188H7C350 402 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 NEMP1O14524 444 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 ZNF500O60304 480 aaPredicted RBP17.61■□□□□ 0.41
NXF1-216ENST00000533499 NDUFS2O75306 463 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 ZNF217O75362 1048 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 ANXA9O76027 345 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 ECEL1O95672 775 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 GAS8O95995 478 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 CPP00450 1065 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 MMP2P08253 660 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 SP9P0CG40 484 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 RPL22P35268 128 aaKnown RBP17.61■□□□□ 0.41
NXF1-216ENST00000533499 NEK3P51956 506 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 GEMP55040 296 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 SEMG2Q02383 582 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 CCDC15Q0P6D6 951 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 CCDC70Q6NSX1 233 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 PRPF39Q86UA1 669 aaKnown RBP17.61■□□□□ 0.41
NXF1-216ENST00000533499 LONP2Q86WA8 852 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 SPATA4Q8NEY3 305 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 LPCAT1Q8NF37 534 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 OR14C36Q8NHC7 312 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 RMDN1Q96DB5 314 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 OXNAD1Q96HP4 312 aaPredicted RBP17.61■□□□□ 0.41
NXF1-216ENST00000533499 FSD1LQ9BXM9 530 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 ITM2CQ9NQX7 267 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 RAB6BQ9NRW1 208 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 PAK5Q9P286 719 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 FAM153AQ9UHL3 310 aa17.61■□□□□ 0.41
NXF1-216ENST00000533499 FEZ2Q9UHY8 353 aaPredicted RBP17.61■□□□□ 0.41
NXF1-216ENST00000533499 GOLGA6CA6NDK9 693 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 GOLGA6BA6NDN3 693 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 A8MX80 341 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 H0Y858 1186 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms