RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GATA5Q9BWX5 397 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 HEMGNQ9BXL5 484 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 AP1M1Q9BXS5 423 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 KRTAP3-1Q9BYR8 98 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 MMRN2Q9H8L6 949 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SNTG1Q9NSN8 517 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ATP8A2Q9NTI2 1148 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 NCKIPSDQ9NZQ3 722 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 NFKBIL1Q9UBC1 381 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 NLKQ9UBE8 527 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 FBXO40Q9UH90 709 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 IPO11Q9UI26 975 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 FBXO4Q9UKT5 387 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 A4GNTQ9UNA3 340 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLC8A2Q9UPR5 921 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ICKQ9UPZ9 632 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 PCDHGB5Q9Y5G0 923 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARHGAP31Q2M1Z3 1444 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SETD1AO15047 1707 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 LRP6O75581 1613 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 KANK1Q14678 1352 aa3.4□□□□□ -1.86
TRAPPC11-205ENST00000506426 LMTK2Q8IWU2 1503 aa3.4□□□□□ -1.86
TRAPPC11-205ENST00000506426 ROBO1Q9Y6N7 1651 aa3.4□□□□□ -1.86
TRAPPC11-205ENST00000506426 A0A1W2PRG0 241 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 FRMD3A2A2Y4 597 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 CCER2I3L3R5 266 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 OVOL3O00110 214 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 KIF1CO43896 1103 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 PAGE4O60829 102 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 DKC1O60832 514 aaKnown RBP eCLIP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GJB3O75712 270 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SEC31AO94979 1220 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NFATC1O95644 943 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 CHRM5P08912 532 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NR2F1P10589 423 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC2A4P14672 509 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NOS1P29475 1434 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GCH1P30793 250 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SOX2P48431 317 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GNAQP50148 359 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 ARSFP54793 590 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SIM1P81133 766 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NIPAL4Q0D2K0 466 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 MTA1Q13330 715 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 FRG1Q14331 258 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NWD1Q149M9 1564 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 RPE65Q16518 533 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 CERKLQ49MI3 558 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SPECC1Q5M775 1068 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC30A6Q6NXT4 461 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 CPLX2Q6PUV4 134 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 RBM44Q6ZP01 1051 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 TFAP2DQ7Z6R9 452 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 ANKRD23Q86SG2 305 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRPF39Q86UA1 669 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 TICAM1Q8IUC6 712 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 VRK3Q8IV63 474 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 ARHGAP12Q8IWW6 846 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM217Q8N7C4 229 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SH3RF3Q8TEJ3 882 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GDPD5Q8WTR4 605 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 UBE2Q2Q8WVN8 375 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GTF3C6Q969F1 213 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 REPS1Q96D71 796 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 NCAPGQ9BPX3 1015 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 STRA6Q9BX79 667 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 TXLNGYQ9BZA5 131 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 FBRSL1Q9HCM7 1045 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 GRHL1Q9NZI5 618 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SH3BP4Q9P0V3 963 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC17A6Q9P2U8 582 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 HAO1Q9UJM8 370 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 INTS6Q9UL03 887 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 MKLN1Q9UL63 735 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 MTMR6Q9Y217 621 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADAM18Q9Y3Q7 739 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 CAPN7Q9Y6W3 813 aa3.4□□□□□ -1.87
TRAPPC11-205ENST00000506426 ANKRD30AQ9BXX3 1397 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZFYVE9O95405 1425 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ANKRD50Q9ULJ7 1429 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 RIMS2Q9UQ26 1411 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 A0A1W2PQ09 198 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 A0A1W2PRQ8 180 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 TARSL2A2RTX5 802 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 GRID2IPA4D2P6 1211 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 TARM1B6A8C7 271 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 USP17L23D6RBM5 183 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 RRHO14718 337 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 LIASO43766 372 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ERAL1O75616 437 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 DDAH2O95865 285 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 FSHBP01225 129 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 LCKP06239 509 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 HEXAP06865 529 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ST6GAL1P15907 406 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 IL11P20809 199 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 MCM3P25205 808 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 EIF2DP41214 584 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 UBA7P41226 1012 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms