RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC11-205ENST00000506426 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
TRAPPC11-205ENST00000506426 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC11-205ENST00000506426 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC11-205ENST00000506426 FOXD1Q16676 465 aa12.46□□□□□ -0.41
TRAPPC11-205ENST00000506426 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
TRAPPC11-205ENST00000506426 MSH5O43196 834 aa11.6□□□□□ -0.55
TRAPPC11-205ENST00000506426 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC11-205ENST00000506426 PPP6R1Q9UPN7 881 aa11.54□□□□□ -0.56
TRAPPC11-205ENST00000506426 ADRA2BP18089 450 aa11.47□□□□□ -0.57
TRAPPC11-205ENST00000506426 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
TRAPPC11-205ENST00000506426 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC11-205ENST00000506426 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
TRAPPC11-205ENST00000506426 SCAF1Q9H7N4 1312 aaKnown RBP10.28□□□□□ -0.76
TRAPPC11-205ENST00000506426 CACNB1Q02641 598 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC11-205ENST00000506426 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
TRAPPC11-205ENST00000506426 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
TRAPPC11-205ENST00000506426 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC11-205ENST00000506426 RNF39Q9H2S5 420 aa9.96□□□□□ -0.82
TRAPPC11-205ENST00000506426 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
TRAPPC11-205ENST00000506426 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC11-205ENST00000506426 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
TRAPPC11-205ENST00000506426 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
TRAPPC11-205ENST00000506426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRAPPC11-205ENST00000506426 KCNA4P22459 653 aa9.47□□□□□ -0.89
TRAPPC11-205ENST00000506426 NCBP3Q53F19 620 aaKnown RBP9.47□□□□□ -0.89
TRAPPC11-205ENST00000506426 NPM3O75607 178 aaKnown RBP9.46□□□□□ -0.9
TRAPPC11-205ENST00000506426 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC11-205ENST00000506426 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC11-205ENST00000506426 EHMT2Q96KQ7 1210 aa9.29□□□□□ -0.92
TRAPPC11-205ENST00000506426 CAPN15O75808 1086 aa9.27□□□□□ -0.93
TRAPPC11-205ENST00000506426 DSG3P32926 999 aa9.27□□□□□ -0.93
TRAPPC11-205ENST00000506426 POTEHQ6S545 545 aa9.24□□□□□ -0.93
TRAPPC11-205ENST00000506426 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
TRAPPC11-205ENST00000506426 SLC4A1APQ9BWU0 796 aaKnown RBP9.12□□□□□ -0.95
TRAPPC11-205ENST00000506426 ABCB7O75027 752 aa9.1□□□□□ -0.95
TRAPPC11-205ENST00000506426 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC11-205ENST00000506426 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
TRAPPC11-205ENST00000506426 ZNF219Q9P2Y4 722 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC11-205ENST00000506426 APLP2Q06481 763 aa8.83□□□□□ -1
TRAPPC11-205ENST00000506426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-205ENST00000506426 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
TRAPPC11-205ENST00000506426 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
TRAPPC11-205ENST00000506426 POLA2Q14181 598 aa8.78□□□□□ -1
TRAPPC11-205ENST00000506426 CHRDL2Q6WN34 429 aa8.74□□□□□ -1.01
TRAPPC11-205ENST00000506426 ZBTB22O15209 634 aa8.7□□□□□ -1.02
TRAPPC11-205ENST00000506426 RBM42Q9BTD8 480 aaKnown RBP8.7□□□□□ -1.02
TRAPPC11-205ENST00000506426 ATF5Q9Y2D1 282 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC11-205ENST00000506426 MYCNP04198 464 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC11-205ENST00000506426 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
TRAPPC11-205ENST00000506426 OSCARQ8IYS5 282 aa8.52□□□□□ -1.05
TRAPPC11-205ENST00000506426 SP7Q8TDD2 431 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC11-205ENST00000506426 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC11-205ENST00000506426 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
TRAPPC11-205ENST00000506426 AKT1S1Q96B36 256 aa8.51□□□□□ -1.05
TRAPPC11-205ENST00000506426 PITPNM1O00562 1244 aa8.44□□□□□ -1.06
TRAPPC11-205ENST00000506426 HAX1O00165 279 aa8.41□□□□□ -1.06
TRAPPC11-205ENST00000506426 EVX2Q03828 476 aa8.41□□□□□ -1.06
TRAPPC11-205ENST00000506426 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC11-205ENST00000506426 FXR2P51116 673 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRAPPC11-205ENST00000506426 ATXN8OSP0DMR3 200 aa8.31□□□□□ -1.08
TRAPPC11-205ENST00000506426 CLEC11AQ9Y240 323 aa8.22□□□□□ -1.09
TRAPPC11-205ENST00000506426 PRKAR2AP13861 404 aaKnown RBP8.21□□□□□ -1.1
TRAPPC11-205ENST00000506426 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC11-205ENST00000506426 SPDYE2BA6NHP3 402 aa8.18□□□□□ -1.1
TRAPPC11-205ENST00000506426 SPDYE6P0CI01 402 aa8.18□□□□□ -1.1
TRAPPC11-205ENST00000506426 SPDYE2Q495Y8 402 aa8.18□□□□□ -1.1
TRAPPC11-205ENST00000506426 FBLN2P98095 1184 aa8.15□□□□□ -1.1
TRAPPC11-205ENST00000506426 CHADLQ6NUI6 762 aa8.14□□□□□ -1.11
TRAPPC11-205ENST00000506426 FKBP8Q14318 412 aa8.13□□□□□ -1.11
TRAPPC11-205ENST00000506426 AMER1Q5JTC6 1135 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-205ENST00000506426 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-205ENST00000506426 C19orf67A6NJJ6 358 aa8.11□□□□□ -1.11
TRAPPC11-205ENST00000506426 GABBR2O75899 941 aa8.1□□□□□ -1.11
TRAPPC11-205ENST00000506426 SPDYE1Q8NFV5 336 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-205ENST00000506426 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
TRAPPC11-205ENST00000506426 RTN4Q9NQC3 1192 aaKnown RBP8.07□□□□□ -1.12
TRAPPC11-205ENST00000506426 PABPN1Q86U42 306 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRAPPC11-205ENST00000506426 LHX8Q68G74 356 aa8.01□□□□□ -1.13
TRAPPC11-205ENST00000506426 PRR29P0C7W0 189 aa7.99□□□□□ -1.13
TRAPPC11-205ENST00000506426 POTEIP0CG38 1075 aa7.98□□□□□ -1.13
TRAPPC11-205ENST00000506426 SLC24A1O60721 1099 aa7.95□□□□□ -1.14
TRAPPC11-205ENST00000506426 CD44P16070 742 aaKnown RBP7.92□□□□□ -1.14
TRAPPC11-205ENST00000506426 FARP1Q9Y4F1 1045 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC11-205ENST00000506426 ZRANB1Q9UGI0 708 aa7.79□□□□□ -1.16
TRAPPC11-205ENST00000506426 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
TRAPPC11-205ENST00000506426 DCBLD2Q96PD2 775 aa7.77□□□□□ -1.17
TRAPPC11-205ENST00000506426 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
TRAPPC11-205ENST00000506426 GALR2O43603 387 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC11-205ENST00000506426 PLSCR2Q9NRY7 297 aa7.76□□□□□ -1.17
TRAPPC11-205ENST00000506426 SPDYE4A6NLX3 237 aa7.75□□□□□ -1.17
TRAPPC11-205ENST00000506426 POTEB2H3BUK9 544 aa7.74□□□□□ -1.17
TRAPPC11-205ENST00000506426 ZNF579Q8NAF0 562 aaKnown RBP7.74□□□□□ -1.17
TRAPPC11-205ENST00000506426 PHF12Q96QT6 1004 aa7.71□□□□□ -1.18
TRAPPC11-205ENST00000506426 OTUD5Q96G74 571 aa7.7□□□□□ -1.18
TRAPPC11-205ENST00000506426 PELP1Q8IZL8 1130 aaKnown RBP7.68□□□□□ -1.18
TRAPPC11-205ENST00000506426 CLCN6P51797 869 aa7.65□□□□□ -1.18
TRAPPC11-205ENST00000506426 PROM2Q8N271 834 aa7.65□□□□□ -1.18
TRAPPC11-205ENST00000506426 MNX1P50219 401 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC11-205ENST00000506426 VASPP50552 380 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms