RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ACTR3BQ9P1U1 418 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 CPSF3Q9UKF6 684 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 HMX3A6NHT5 357 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 KPNA7A9QM74 516 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 hCG_2039718K7EN88 272 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 NOP56O00567 594 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 TLR3O15455 904 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF623O75123 536 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 TOM1L1O75674 476 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 NADKO95544 446 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 STARD3NLO95772 234 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 MPOP05164 745 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 IL1R1P14778 569 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 NCF2P19878 526 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 RFC2P35250 354 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 GP2P55259 537 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 GJA9P57773 515 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 GSTO1P78417 241 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 PRKAA1Q13131 559 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 GPR50Q13585 617 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 SQLEQ14534 574 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 PSMD5Q16401 504 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 PGS1Q32NB8 556 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 SYT6Q5T7P8 510 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 TMC5Q6UXY8 1006 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 CAPN12Q6ZSI9 719 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 ADGRG5Q8IZF4 528 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 CARNMT1Q8N4J0 409 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 MYCT1Q8N699 235 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 TRPV3Q8NET8 790 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 NCLNQ969V3 563 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 PDXPQ96GD0 296 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 TOE1Q96GM8 510 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 HSFY1Q96LI6 401 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 CNPY3Q9BT09 278 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 MTG1Q9BT17 334 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 CCDC32Q9BV29 185 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 UPF3AQ9H1J1 476 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 RBAKQ9NYW8 714 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 HSPBP1Q9NZL4 362 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 ZC3H7BQ9UGR2 993 aaKnown RBP4.84□□□□□ -1.63
PRKD3-210ENST00000494667 HMGXB4Q9UGU5 601 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 SPEF1Q9Y4P9 236 aa4.84□□□□□ -1.63
PRKD3-210ENST00000494667 IGLV3-22A0A075B6J6 115 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 H0Y626 953 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 CTDSP2O14595 271 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 MEIS2O14770 477 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 AIM2O14862 343 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 SEC14L5O43304 696 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 PSMD10O75832 226 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 CHRNA1P02708 482 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 ALBP02768 609 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 KRT8P05787 483 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L8P0C7I0 530 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 KRT10P13645 584 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 JUNDP17535 347 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 FASP25445 335 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 HADHAP40939 763 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 CYP2J2P51589 502 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 RPL10AP62906 217 aaKnown RBP4.84□□□□□ -1.64
PRKD3-210ENST00000494667 TNFAIP2Q03169 654 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 MVKQ03426 396 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 INPP5AQ14642 412 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 SLC9A4Q6AI14 798 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L2Q6R6M4 530 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 ZCCHC23Q6ZST2 131 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 USP37Q86T82 979 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 UNC45BQ8IWX7 931 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 MINDY1Q8N5J2 469 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 CCDC185Q8N715 623 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 EFCAB3Q8N7B9 438 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 Q8N9G6 341 aaPredicted RBP4.84□□□□□ -1.64
PRKD3-210ENST00000494667 PSD4Q8NDX1 1056 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 ZFAND1Q8TCF1 268 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 RSAD2Q8WXG1 361 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 DCPSQ96C86 337 aaKnown RBP4.84□□□□□ -1.64
PRKD3-210ENST00000494667 FAM84AQ96KN4 292 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 MMP19Q99542 508 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 OXSMQ9NWU1 459 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 SYBUQ9NX95 663 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.84□□□□□ -1.64
PRKD3-210ENST00000494667 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.84□□□□□ -1.64
PRKD3-210ENST00000494667 STAP1Q9ULZ2 295 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 SNX13Q9Y5W8 968 aa4.84□□□□□ -1.64
PRKD3-210ENST00000494667 PRORSD1PA6NEY8 169 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 AGAP5A6NIR3 686 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 WTIPA6NIX2 430 aaPredicted RBP4.83□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L5A8MUK1 530 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 MAN1A2O60476 641 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 NPHS1O60500 1241 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 TMCC2O75069 709 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 YES1P07947 543 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 SUPT20HL2P0C7V6 817 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 FOSL1P15407 271 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF30P17039 623 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 CHRM3P20309 590 aa4.83□□□□□ -1.64
PRKD3-210ENST00000494667 NR4A1P22736 598 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms