RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 DPY19L3Q6ZPD9 716 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 DSG4Q86SJ6 1040 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 CHPFQ8IZ52 775 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 OR2A12Q8NGT7 310 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 OR8D1Q8WZ84 308 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 ARNT2Q9HBZ2 717 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 CASS4Q9NQ75 786 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 RPL26L1Q9UNX3 145 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 RAI2Q9Y5P3 530 aa23.81■■□□□ 1.4
TSPAN4-202ENST00000397396 MYO10Q9HD67 2058 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 LOC285095A0A1B0GVY8 99 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 BNIP3LO60238 219 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 NDST3O95803 873 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 EGFP01133 1207 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 FGF1P05230 155 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 IL12RB1P42701 662 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 SYCP2LQ5T4T6 812 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 CFAP58Q5T655 872 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 ARMC12Q5T9G4 340 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 RANBP10Q6VN20 620 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 HNRNPLLQ8WVV9 542 aaKnown RBP23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 PTPRN2Q92932 1015 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 ZDHHC6Q9H6R6 413 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 FBRSQ9HAH7 460 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 BFARQ9NZS9 450 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 IL36AQ9UHA7 158 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 STON1Q9Y6Q2 735 aa23.8■■□□□ 1.4
TSPAN4-202ENST00000397396 C5orf42Q9H799 3197 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 PRNPP04156 253 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 MYBL2P10244 700 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 NFKBIAP25963 317 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 NTSR1P30989 418 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 MAGEA3P43357 314 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 NPY2RP49146 381 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 LRRC32Q14392 662 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 SPARCL1Q14515 664 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 RELL1Q8IUW5 271 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 SFTPA1Q8IWL2 248 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 SYNPOQ8N3V7 929 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 PAF1Q8N7H5 531 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 AENQ8WTP8 325 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 CAVIN3Q969G5 261 aa23.79■■□□□ 1.4
TSPAN4-202ENST00000397396 TTC24A2A3L6 582 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 E7ESA3 106 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 HTRA2O43464 458 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 EPHX1P07099 455 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 SEC13P55735 322 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 STARD3Q14849 445 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 SLC1A5Q15758 541 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 ZNF534Q76KX8 674 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 CAND1Q86VP6 1230 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 CCDC25Q86WR0 208 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 CCNJLQ8IV13 435 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 GSPT2Q8IYD1 628 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 GJD3Q8N144 294 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 NDUFAF2Q8N183 169 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 OR52K1Q8NGK4 314 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 OR6K2Q8NGY2 324 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 HCAR2Q8TDS4 363 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 SRPK1Q96SB4 655 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 NELL2Q99435 816 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 IL22Q9GZX6 179 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 CACNA2D2Q9NY47 1150 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 CA14Q9ULX7 337 aa23.78■■□□□ 1.4
TSPAN4-202ENST00000397396 SYNCRIPO60506 623 aaKnown RBP23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 GJB3O75712 270 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 AGTP01019 485 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 ALADP13716 330 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 PRKCHP24723 683 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 TIE1P35590 1138 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 GRIA4P48058 902 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 TRAF2Q12933 501 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 LAMB3Q13751 1172 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 CCINQ13939 588 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 GDPD4Q6W3E5 623 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 TMIEQ8NEW7 156 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 SPOCK2Q92563 424 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 EZH1Q92800 747 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 TRIB3Q96RU7 358 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 GABRG3Q99928 467 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 NAT9Q9BTE0 207 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 SUV39H2Q9H5I1 410 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 PCDHGC4Q9Y5F7 938 aa23.77■■□□□ 1.4
TSPAN4-202ENST00000397396 COL6A3P12111 3177 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 EYSQ5T1H1 3165 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 SDR42E2A6NKP2 422 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 TRAFD1O14545 582 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 DYNC1I1O14576 645 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 FZD6O60353 706 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 RNASEH1O60930 286 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 SIN3BO75182 1162 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 USP12O75317 370 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 PGLSO95336 258 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 HLA-EP13747 358 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 EPHB1P54762 984 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 STARD6P59095 220 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 POLR2LP62875 67 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 PDIA2Q13087 525 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 BBS9Q3SYG4 887 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 EOGTQ5NDL2 527 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms