RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NR2C2P49116 596 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 CEACAM7Q14002 265 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 KRT80Q6KB66 452 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 MYO1HQ8N1T3 1032 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 KYQ8NBH2 561 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 OR9I1Q8NGQ6 314 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ELMO2Q96JJ3 720 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 RBBP8Q99708 897 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 MORF4L1Q9UBU8 362 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 CORINQ9Y5Q5 1042 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 PTPRFP10586 1907 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 DYTNA2CJ06 578 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 C7orf72A4D263 438 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 G3V2L1 256 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF195O14628 629 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 GNA12Q03113 381 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 FGD3Q5JSP0 725 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 DEPDC1Q5TB30 811 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ESRP1Q6NXG1 681 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 BNC2Q6ZN30 1099 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 FSTL5Q8N475 847 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 EME1Q96AY2 570 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 PIF1Q9H611 641 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 WDR41Q9HAD4 459 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 IGSF9Q9P2J2 1179 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 RIMS3Q9UJD0 308 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ARHGEF37A1IGU5 675 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 PLOD2O00469 737 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 GIPC1O14908 333 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CNOT3O75175 753 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CYP2C9P11712 490 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 PABPC1P11940 636 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 YBX3P16989 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 EPHX2P34913 555 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 DPP6P42658 865 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 IFNEQ86WN2 208 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 PSTKQ8IV42 348 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 NSMCE3Q96MG7 304 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CPNE1Q99829 537 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 KIAA1257Q9ULG3 409 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 KDM1AO60341 852 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 H6PDO95479 791 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 NR4A1P22736 598 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 MAXP61244 160 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 NR1D2Q14995 579 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF829Q3KNS6 432 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 GPR180Q86V85 440 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 TMEM79Q9BSE2 394 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 MLPHQ9BV36 600 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 TKTL2Q9H0I9 626 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF638Q14966 1978 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-202ENST00000380281 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 AHSGP02765 367 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF12P17014 697 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CDH13P55290 713 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 SF3B4Q15427 424 aaKnown RBP eCLIP12.57□□□□□ -0.41e-8■■■■■ 43.8
PRPF40B-202ENST00000380281 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 EPGNQ6UW88 154 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CEP97Q8IW35 865 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ARRDC4Q8NCT1 418 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 FAM110BQ8TC76 370 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 TMEM30AQ9NV96 361 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 OR12D3Q9UGF7 316 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 DPYSL4O14531 572 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 GPC4O75487 556 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ADRA1BP35368 520 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CASP2P42575 452 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 PTPN9P43378 593 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 BMXP51813 675 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 LIMK2P53671 638 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC12A2P55011 1212 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 SNX16P57768 344 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms