RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CENPLQ8N0S6 344 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 OR13J1Q8NGT2 312 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 KCTD4Q8WVF5 259 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 PLD4Q96BZ4 506 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 MYRFLQ96LU7 910 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 CYP4F11Q9HBI6 524 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 DNAJC28Q9NX36 388 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 RUVBL2Q9Y230 463 aaKnown RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 CDH4P55283 916 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 POU4F1Q01851 419 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 GNA12Q03113 381 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 TUBB3Q13509 450 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 RABGAP1LQ5R372 815 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 TPGS2Q68CL5 300 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 FAM13CQ8NE31 585 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 VWCEQ96DN2 955 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 CCDC106Q9BWC9 280 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 PCDH10Q9P2E7 1040 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 RPL26L1Q9UNX3 145 aaKnown RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 ZFP37Q9Y6Q3 630 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 A0A0D9SEW6 157 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TK2O00142 265 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 MUSKO15146 869 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 SOD2P04179 222 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 SBK3P0C264 359 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 HOXD9P28356 352 aaPredicted RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 PGGT1BP53609 377 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 PRKAA2P54646 552 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TAF12Q16514 161 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 ALG1LQ6GMV1 187 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 MAVSQ7Z434 540 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 GALNT7Q86SF2 657 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TREML1Q86YW5 311 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 DENND1CQ8IV53 801 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 AGAP11Q8TF27 550 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 STYXQ8WUJ0 223 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TOP1MTQ969P6 601 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 ELMO2Q96JJ3 720 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 FEM1CQ96JP0 617 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 CADM1Q9BY67 442 aaKnown RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TRPM5Q9NZQ8 1165 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 APOBEC2Q9Y235 224 aaKnown RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 H3BNC9 293 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF195O14628 629 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 GYG2O15488 501 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC7A4O43246 635 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 HSPA4LO95757 839 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 EPOP01588 193 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 CCND1P24385 295 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 LEPRP48357 1165 aaKnown RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 ALDH18A1P54886 795 aaKnown RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TAS2R39P59534 338 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 FSTL5Q8N475 847 aaPredicted RBP20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 GPATCH11Q8N954 259 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 TAS2R1Q9NYW7 299 aa20.53■□□□□ 0.88
CHRNA3-202ENST00000348639 A0A087X1B8 175 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 TARM1B6A8C7 271 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 HLA-DPA1P20036 260 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 IDH3AP50213 366 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 DSG1Q02413 1049 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF460Q14592 562 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 TSNAXIP1Q2TAA8 658 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 LIPMQ5VYY2 423 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 LRRC8EQ6NSJ5 796 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 CNSTQ6PJW8 725 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 RINLQ6ZS11 566 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 IFT43Q96FT9 208 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 SCYL1Q96KG9 808 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF558Q96NG5 402 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 GPR78Q96P69 363 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 OMDQ99983 421 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 GATA5Q9BWX5 397 aaPredicted RBP20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
CHRNA3-202ENST00000348639 GSC2O15499 205 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CLDN11O75508 207 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 GJB3O75712 270 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 STC2O76061 302 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 KLHL2O95198 593 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 KLKB1P03952 638 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 FGF1P05230 155 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CLTBP09497 229 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 MYL4P12829 197 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 ALDH1A3P47895 512 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 DEFB103AP81534 67 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 BBS5Q8N3I7 341 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 OR7D4Q8NG98 312 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 OR52K2Q8NGK3 314 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 TRMT2BQ96GJ1 504 aaKnown RBP20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 PRICKLE1Q96MT3 831 aaPredicted RBP20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 MFSD1Q9H3U5 465 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CHD5Q8TDI0 1954 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 AURKAO14965 403 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 LDB2O43679 373 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 ENO1P06733 434 aaKnown RBP20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CORO1AP31146 461 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms