RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GTF2IRD2Q86UP8 949 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CENPLQ8N0S6 344 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 DHRSXQ8N5I4 330 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 PNPT1Q8TCS8 783 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 RAB2BQ8WUD1 216 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 CENPNQ96H22 339 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 SH3YL1Q96HL8 342 aaPredicted RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 NSMCE3Q96MG7 304 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 GPR22Q99680 433 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.34
CCDC60-201ENST00000327554 TRAF6Q9Y4K3 522 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 ST14Q9Y5Y6 855 aa12.9□□□□□ -0.34
CCDC60-201ENST00000327554 AQP12BA6NM10 295 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 MFSD11O43934 449 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 NPHS1O60500 1241 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 USP12O75317 370 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SLC35E2BP0CK96 405 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 FASP25445 335 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PTPN9P43378 593 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 OSTNP61366 133 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 DGKZQ13574 1117 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF846Q147U1 533 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PPP1R3AQ16821 1122 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 CCNYL2Q5T2Q4 361 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 LCLAT1Q6UWP7 414 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PIGZQ86VD9 579 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 AQP12AQ8IXF9 295 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF567Q8N184 647 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 C1orf127Q8N9H9 656 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 MFSD3Q96ES6 412 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 OSBPL2Q9H1P3 480 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 RAD21L1Q9H4I0 556 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 TLK1Q9UKI8 766 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SNX9Q9Y5X1 595 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 CLDN25C9JDP6 229 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 NME4O00746 187 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 GOT1P17174 413 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 OXTRP30559 389 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 ERO1BQ86YB8 467 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SPPL2CQ8IUH8 684 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 BPIFB6Q8NFQ5 453 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 OR9I1Q8NGQ6 314 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SLC25A23Q9BV35 468 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 LHPPQ9H008 270 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 VPS51Q9UID3 782 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 ERVK-11Q9UQG0 969 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 PARP14Q460N5 1801 aa12.89□□□□□ -0.35
CCDC60-201ENST00000327554 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 UBDO15205 165 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 B4GAT1O43505 415 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 GABBR2O75899 941 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SAT1P21673 171 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 AVPR1AP37288 418 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ADARB1P78563 741 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 IFITM3Q01628 133 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 BFSP2Q13515 415 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 EML3Q32P44 896 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TMTC4Q5T4D3 741 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 KCNMB4Q86W47 210 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ADGRG5Q8IZF4 528 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 CCDC185Q8N715 623 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 GPR78Q96P69 363 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SIAEQ9HAT2 523 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TNFRSF12AQ9NP84 129 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 AKIP1Q9NQ31 210 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TBC1D13Q9NVG8 400 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 GTSE1Q9NYZ3 720 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 POU2F3Q9UKI9 436 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 VWA7Q9Y334 891 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SNAP29O95721 258 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 PTPN2P17706 415 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms