RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Nlrp1bA1Z198 1177 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Zfp780bE9Q2S6 806 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slc27a6E9Q9W4 619 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rgs5O08850 181 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AlbP07724 608 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slc2a2P14246 523 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Kcnj2P35561 428 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Yy2Q3TTC2 378 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slfn4Q3UV66 602 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Reep1Q8BGH4 201 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 R3hcc1lQ8BJM3 775 aaKnown RBP16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm4922Q8C0N0 497 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mcoln3Q8R4F0 553 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ap3s1Q9DCR2 193 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Sertad2Q9JJG5 309 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rps6kb2Q9Z1M4 485 aa16.85■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mfsd13bA0A1L1SUA2 455 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm12394A2AKP6 982 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 RarbP22605 482 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Nr2c2P49117 596 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 LipeP54310 759 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Creb1Q01147 341 aaKnown RBP16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Col28a1Q2UY11 1141 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Inpp4bQ6P1Y8 924 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Glra2Q7TNC8 452 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Skida1Q80YR3 822 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Nox1Q8CIZ9 591 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 CenpsQ9D084 142 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cst11Q9D269 139 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Q9D937 123 aaKnown RBP16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Snap29Q9ERB0 260 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm29106A0A087WSP8 697 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm5072A2AHM1 344 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ttll11A4Q9F4 727 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ssxb8B1AY40 170 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AlpiF8VPQ6 554 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Banf1O54962 89 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gja5Q01231 358 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tmem237Q3V0J1 427 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Wee2Q66JT0 555 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tmcc2Q80W04 706 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 PdgfdQ925I7 370 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 MkksQ9JI70 570 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm14692A2BH01 229 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dgcr6O35347 198 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 DgkqQ6P5E8 934 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Syt16Q7TN83 639 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Phf24Q80TL4 400 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Brat1Q8C3R1 822 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cox18Q8VC74 331 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ndufaf7Q9CWG8 436 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 PllpQ9DCU2 182 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gpr63Q9EQQ3 425 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Katna1Q9WV86 491 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm42688A0A0R3P9D1 673 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Vmn2r50E9PW61 861 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 AprtP08030 180 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Alox12eP55249 662 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Muc1Q02496 630 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 LcorlQ3U285 600 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Q3UST5 385 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cadm1Q8R5M8 456 aaKnown RBP16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Olfr393Q8VGR6 312 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mad2l1Q9Z1B5 205 aa16.84■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Gm45837F7D3W5 961 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 OsbpQ3B7Z2 805 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Nr6a1Q64249 495 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 FAM120AQ6A0A9 1112 aaKnown RBP16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 4921511C20RikQ8BVT7 469 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Pde2aQ922S4 916 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Rad51cQ924H5 366 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Cntd1Q9D995 334 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mbd3l1Q9D9H3 186 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Il21Q9ES17 146 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Fbxo16Q9QZM9 334 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Fam155bA2BDP1 471 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tgfb2P27090 414 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Slc1a2P43006 572 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Olfr813Q7TRH5 310 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Ssxb1Q9CPU1 170 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 MceeQ9D1I5 178 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Tmem115Q9WUH1 350 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Bmp15Q9Z0L4 392 aa16.83■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Mxd1P50538 227 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Grb10Q60760 621 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Lrrc27Q80YS5 523 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Zbtb8bQ8CII0 484 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pgam1Q9DBJ1 254 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gm3526E9PZM0 191 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Glyatl3E9Q5L8 290 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cdh18E9Q9Q6 790 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ppp3cbP48453 525 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 NrlP54846 237 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gpatch4Q3TFK5 415 aaKnown RBP16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pgrmc2Q80UU9 217 aaKnown RBP16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Tmem221Q8K071 230 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Txnrd3Q99MD6 652 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Sept5Q9Z2Q6 369 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cdk14O35495 469 aa16.83■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Serpina5P70458 405 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms