RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, human

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-210	ENST00000555668	SCFD2	Q8WU76	684 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	KBTBD7	Q8WVZ9	684 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TRUB1	Q8WWH5	349 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	RAB7B	Q96AH8	199 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TAMM41	Q96BW9	452 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TLCD1	Q96CP7	247 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	MTBP	Q96DY7	904 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	CHFR	Q96EP1	664 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	EDC3	Q96F86	508 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	LOXL4	Q96JB6	756 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	ZC3H10	Q96K80	434 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TMEM68	Q96MH6	324 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	SNX18	Q96RF0	628 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TWNK	Q96RR1	684 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	PLEKHF1	Q96S99	279 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	MMS19	Q96T76	1030 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	SLC29A1	Q99808	456 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	ZFYVE21	Q9BQ24	234 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	C17orf62	Q9BQA9	187 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TMEM79	Q9BSE2	394 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	NYX	Q9GZU5	481 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	HOXD1	Q9GZZ0	328 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	CSRNP2	Q9H175	543 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	LHX5	Q9H2C1	402 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	GHITM	Q9H3K2	345 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	SLA2	Q9H6Q3	261 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	EPS8L2	Q9H6S3	715 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	ZNF696	Q9H7X3	374 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	RMND5A	Q9H871	391 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	LY9	Q9HBG7	655 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	ARHGEF4	Q9NR80	690 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	GIMAP4	Q9NUV9	329 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	FANCL	Q9NW38	375 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	UCKL1	Q9NWZ5	548 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	GPRC5D	Q9NZD1	345 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	FTSJ1	Q9UET6	329 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	SH3BGRL2	Q9UJC5	107 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	CPSF3	Q9UKF6	684 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	BAG5	Q9UL15	447 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	CDH7	Q9ULB5	785 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	DIMT1	Q9UNQ2	313 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	DTX4	Q9Y2E6	619 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	MYRF	Q9Y2G1	1151 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	DERA	Q9Y315	318 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	VWA7	Q9Y334	891 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	MTF2	Q9Y483	593 aa	Predicted RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	DTNA	Q9Y4J8	743 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	EID1	Q9Y6B2	187 aa		4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	MYH9	P35579	1960 aa	Known RBP	4.13	□□□□□ -1.75
GPHN-210	ENST00000555668	ZFYVE9	O95405	1425 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ATP7A	Q04656	1500 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ARHGEF40	Q8TER5	1519 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	KIAA0586	Q9BVV6	1533 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TAF1	P21675	1872 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TRAV20	A0A0B4J274	112 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	PNMA6E	A0A0J9YXQ4	647 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ZNF98	A6NK75	572 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TSPY2	A6NKD2	308 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	SMIM23	A6NLE4	172 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ZNF839	A8K0R7	811 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TARM1	B6A8C7	271 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	hCG_2039718	K7EN88	272 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	UBXN8	O00124	270 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TAF4	O00268	1085 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TOR1A	O14656	332 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	CAPN9	O14815	690 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	KCNN4	O15554	427 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	KRT86	O43790	486 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	B4GALT3	O60512	393 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	FKBP6	O75344	327 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	PTP4A3	O75365	173 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ALDH1A2	O94788	518 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	HAUS5	O94927	633 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ZWINT	O95229	277 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	SNAP29	O95721	258 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	AGR2	O95994	175 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	APOC1	P02654	83 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	CALB1	P05937	261 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	APOA4	P06727	396 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TSPY3	P0CV98	308 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TSPY8	P0CW00	308 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	SMIM18	P0DKX4	95 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	SELL	P14151	372 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	POU2F1	P14859	743 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	UQCRB	P14927	111 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	TMEM11	P17152	192 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ITGB6	P18564	788 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	ITIH1	P19827	911 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	F8A1	P23610	371 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	CCNE1	P24864	410 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	PON1	P27169	355 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	PTPN4	P29074	926 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	SLC5A2	P31639	672 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	GUCY1A2	P33402	732 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	IDUA	P35475	653 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	GRK3	P35626	688 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	PAFAH1B1	P43034	410 aa		4.12	□□□□□ -1.75
GPHN-210	ENST00000555668	MMP13	P45452	471 aa		4.12	□□□□□ -1.75

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