RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PRAMEF11O60813 436 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 PALMO75781 387 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 TRIM16O95361 564 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 IGSF6O95976 241 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 CYP1A2P05177 515 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 TPM1P09493 284 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 ATXN1LP0C7T5 689 aaKnown RBP11.07□□□□□ -0.64
TMEM116-215ENST00000552374 THEGLP0DJG4 465 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 RARAP10276 462 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 HNRNPA2B1P22626 353 aaKnown RBP11.07□□□□□ -0.64
TMEM116-215ENST00000552374 AMPD1P23109 780 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 ARL4AP40617 200 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 GRK6P43250 576 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 HCAR3P49019 387 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 ARRB1P49407 418 aaPredicted RBP11.07□□□□□ -0.64
TMEM116-215ENST00000552374 ADKP55263 362 aaKnown RBP11.07□□□□□ -0.64
TMEM116-215ENST00000552374 OVGP1Q12889 678 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 IQCHQ86VS3 1027 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 OSBPL1AQ9BXW6 950 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 CTTNBP2NLQ9P2B4 639 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 WASF3Q9UPY6 502 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 APOBEC2Q9Y235 224 aaKnown RBP11.07□□□□□ -0.64
TMEM116-215ENST00000552374 PCDH15Q96QU1 1955 aa11.07□□□□□ -0.64
TMEM116-215ENST00000552374 TSPAN6O43657 245 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 AP1G1O43747 822 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 PIGNO95427 931 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 TIMP2P16035 220 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ITIH2P19823 946 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 XPAP23025 273 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-215ENST00000552374 HNRNPH3P31942 346 aaKnown RBP11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ABL2P42684 1182 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ZNF135P52742 658 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-215ENST00000552374 TRIM14Q14142 442 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 FGL2Q14314 439 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 SHBQ15464 509 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 INAVAQ3KP66 663 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 TXNRD3NBQ6F5E7 133 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 KIAA1161Q6NSJ0 714 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ARHGAP36Q6ZRI8 547 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 Q6ZSR6 202 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 POLNQ7Z5Q5 900 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 VSTM4Q8IW00 320 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 TP53INP2Q8IXH6 220 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 TMEM145Q8NBT3 493 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ZNF564Q8TBZ8 553 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-215ENST00000552374 SAP25Q8TEE9 199 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 RAB7BQ96AH8 199 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ERVMER34-1Q9H9K5 563 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 SP110Q9HB58 689 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.06□□□□□ -0.64
TMEM116-215ENST00000552374 LHX3Q9UBR4 397 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 GGT7Q9UJ14 662 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 KLK13Q9UKR3 277 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 ITM2BQ9Y287 266 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 MFHAS1Q9Y4C4 1052 aa11.06□□□□□ -0.64
TMEM116-215ENST00000552374 CHD8Q9HCK8 2581 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 RAD51BO15315 384 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 TNFSF14O43557 240 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 AKR1B10O60218 316 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 BUB1BO60566 1050 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 SDC3O75056 442 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 GJC1P36383 396 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 RXRGP48443 463 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CDH6P55285 790 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 DPYSQ14117 519 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 KRT81Q14533 505 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 DPYSL2Q16555 572 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 HADHQ16836 314 aaKnown RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 TMEM259Q4ZIN3 620 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 AFMIDQ63HM1 303 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 TMCO3Q6UWJ1 677 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 ARHGAP12Q8IWW6 846 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 OXR1Q8N573 874 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 LZTR1Q8N653 840 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 EID2Q8N6I1 236 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 NPWQ8N729 165 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 PAF1Q8N7H5 531 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 TSEN2Q8NCE0 465 aaKnown RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 OR13H1Q8NG92 308 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CTNNBL1Q8WYA6 563 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 BMFQ96LC9 184 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CSPG4P5Q96PW8 444 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CHP1Q99653 195 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CINPQ9BW66 212 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 PACSIN1Q9BY11 444 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 CPEB1Q9BZB8 566 aaKnown RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 SUV39H2Q9H5I1 410 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 PDFQ9HBH1 243 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 ETNK2Q9NVF9 386 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 FTSJ1Q9UET6 329 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 IPO11Q9UI26 975 aaKnown RBP11.05□□□□□ -0.64
TMEM116-215ENST00000552374 HS3ST3A1Q9Y663 406 aa11.05□□□□□ -0.64
TMEM116-215ENST00000552374 POM121BA6NF01 834 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms