RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 F5H5T6 163 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC22A2O15244 555 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 LDB2O43679 373 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 USP12O75317 370 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TIMP1P01033 207 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 C2P06681 752 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 POU2F2P09086 479 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC35E2BP0CK96 405 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 AOC1P19801 751 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 HNRNPH1P31943 449 aaKnown RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CSNK1DP48730 415 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC12A1Q13621 1099 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CHI3L2Q15782 390 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TRIM60Q495X7 471 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 RAP1GAP2Q684P5 730 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CEP57Q86XR8 500 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 KIAA1958Q8N8K9 716 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 POLR1EQ9GZS1 481 aaKnown RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 WWP1Q9H0M0 922 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CXorf56Q9H5V9 222 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 YIPF1Q9Y548 306 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TBX18O95935 607 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SERPINA6P08185 405 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 PTPN4P29074 926 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TYK2P29597 1187 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 PRDX6P30041 224 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 GNA12Q03113 381 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TYSND1Q2T9J0 566 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 INO80DQ53TQ3 878 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 HSP90AA5PQ58FG0 334 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 ADGRF1Q5T601 910 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 METTL21CQ5VZV1 264 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CPXM2Q8N436 756 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 RAB3IPQ96QF0 476 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-206ENST00000549505 CCDC106Q9BWC9 280 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 TXNDC16Q9P2K2 825 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SLC17A6Q9P2U8 582 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 GGT7Q9UJ14 662 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
RAB5B-206ENST00000549505 A0A096LPK6 155 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CCDC22O60826 627 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ZMPSTE24O75844 475 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CLTBP09497 229 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CPA3P15088 417 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 OGNP20774 298 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 PPM1AP35813 382 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 GJA8P48165 433 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CCNG1P51959 295 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 FAM182AQ5T1J6 154 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CRLF3Q8IUI8 442 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 PIWIL2Q8TC59 973 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 NSMCE1Q8WV22 266 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 UTP4Q969X6 686 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SCLYQ96I15 445 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 B3GALT6Q96L58 329 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 UBXN10Q96LJ8 280 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SEPT5Q99719 369 aaPredicted RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 IRAK3Q9Y616 596 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 A0A1B0GVM2 712 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 TCAF2A6NFQ2 919 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 NPHS1O60500 1241 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 PQBP1O60828 265 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 KLHL2O95198 593 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 KLKB1P03952 638 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CALB2P22676 271 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 RAB10P61026 200 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ABCE1P61221 599 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SLC7A9P82251 487 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 NFKB2Q00653 900 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 GRM3Q14832 879 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SIRPB2Q5JXA9 342 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ESRP1Q6NXG1 681 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 LILRA6Q6PI73 481 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 PARP9Q8IXQ6 854 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CENPLQ8N0S6 344 aaPredicted RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ADAMTS19Q8TE59 1207 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 CLP1Q92989 425 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ERP27Q96DN0 273 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 NUDCD1Q96RS6 583 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SLC13A1Q9BZW2 595 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 DRC3Q9H069 523 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SP110Q9HB58 689 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
RAB5B-206ENST00000549505 TRPM5Q9NZQ8 1165 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 SEPT3Q9UH03 358 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ZFP69BQ9UJL9 534 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 MIA3Q5JRA6 1907 aa10.08□□□□□ -0.8
RAB5B-206ENST00000549505 H7C0S8 307 aa10.07□□□□□ -0.8
RAB5B-206ENST00000549505 SOAT2O75908 522 aa10.07□□□□□ -0.8
RAB5B-206ENST00000549505 TCF3P15923 654 aa10.07□□□□□ -0.8
RAB5B-206ENST00000549505 ADSLP30566 484 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms