RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TMEM26Q6ZUK4 368 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 EFCAB3Q8N7B9 438 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 OR56A4Q8NGH8 313 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ZFP28Q8NHY6 868 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 GTF3C2Q8WUA4 911 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 KCTD4Q8WVF5 259 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 LRTOMTQ8WZ04 291 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PLEKHA8Q96JA3 519 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 THUMPD3Q9BV44 507 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 UNKQ9C0B0 810 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CNTN3Q9P232 1028 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TLL2Q9Y6L7 1015 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PDZK1P1A8MUH7 402 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 VPS26AO75436 327 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TIPRLO75663 272 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 IPO13O94829 963 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 RHOBTB1O94844 696 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SEC24AO95486 1093 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CD48P09326 243 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CPB1P15086 417 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 POLD1P28340 1107 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CD97P48960 835 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 FBXO47Q5MNV8 452 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TMC5Q6UXY8 1006 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 HACD2Q6Y1H2 254 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ERMP1Q7Z2K6 904 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 AKAP14Q86UN6 197 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CBR4Q8N4T8 237 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TTC16Q8NEE8 873 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 RDH12Q96NR8 316 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 MID1IP1Q9NPA3 183 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TRAF6Q9Y4K3 522 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CXorf49A8MYA2 514 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 WDR47O94967 919 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 GLP2RO95838 553 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 IL5RAQ01344 420 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 IKBKEQ14164 716 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SLC25A52Q3SY17 297 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 OTUD3Q5T2D3 398 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TRMT10BQ6PF06 316 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PLPPR4Q7Z2D5 763 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CUZD1Q86UP6 607 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 DEFB106AQ8N104 65 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SVOPLQ8N434 492 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PCDH19Q8TAB3 1148 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PKP2Q99959 881 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CD274Q9NZQ7 290 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 COL2A1P02458 1487 aaPredicted RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SLC22A1O15245 554 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 NTRK1P04629 796 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 ANXA6P08133 673 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 IL1R2P27930 398 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 CCT8P50990 548 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TRIM32Q13049 653 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 MRPL28Q13084 256 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 POLD3Q15054 466 aaPredicted RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TAF12Q16514 161 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SLC9B1Q4ZJI4 515 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 UBAP2Q5T6F2 1119 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 NANOGNBQ7Z5D8 188 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 FBXO39Q8N4B4 442 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 USP33Q8TEY7 942 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 FEM1CQ96JP0 617 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 MMP19Q99542 508 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SLC30A1Q9Y6M5 507 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 KIF13BQ9NQT8 1826 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TRIM43BA6NCK2 446 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 PSMB9P28065 219 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 ICAM3P32942 547 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 IREB2P48200 963 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 RENBPP51606 427 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TXNL4AP83876 142 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 FUT11Q495W5 492 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 CCDC81Q6ZN84 652 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 CPSF7Q8N684 471 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TSPEARQ8WU66 669 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TRUB1Q8WWH5 349 aaKnown RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 TFAP2BQ92481 460 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 SEPHS2Q99611 448 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 BCL7BQ9BQE9 202 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 CDT1Q9H211 546 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 GBA3Q9H227 469 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 ADAMTS10Q9H324 1103 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
GABRA1-202ENST00000393943 XPNPEP1Q9NQW7 623 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 ZC4H2Q9NQZ6 224 aa8.68□□□□□ -1.02
GABRA1-202ENST00000393943 DIABLOQ9NR28 239 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms