RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TSPAN9O75954 239 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 NADKO95544 446 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CYP19A1P11511 503 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CTRB1P17538 263 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 POLR2CP19387 275 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TBXAS1P24557 533 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 GNA15P30679 374 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 GRIA3P42263 894 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TUFMP49411 452 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CLK3P49761 638 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 PPP5CP53041 499 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 BNIP2Q12982 314 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 PRKAA1Q13131 559 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TOP3AQ13472 1001 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 DNASE1L3Q13609 305 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TFDP2Q14188 446 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CDK10Q15131 360 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 LMBRD2Q68DH5 695 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CTRB2Q6GPI1 263 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 HMBOX1Q6NT76 420 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 PRMT9Q6P2P2 845 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 UNC5AQ6ZN44 842 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SPRED1Q7Z699 444 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 ADCK1Q86TW2 530 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SCML4Q8N228 414 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 MFSD4AQ8N468 514 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SVOPQ8N4V2 548 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF781Q8N8C0 355 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 FAM71DQ8N9W8 422 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CMASQ8NFW8 434 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 OSCP1Q8WVF1 389 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SEMA4DQ92854 862 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 EGLN2Q96KS0 407 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 DEPDC7Q96QD5 511 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 EBNA1BP2Q99848 306 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CBWD1Q9BRT8 395 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF518BQ9C0D4 1074 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TRIT1Q9H3H1 467 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 RSAD1Q9HA92 442 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CCM2LQ9NUG4 571 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 HOXC10Q9NYD6 342 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 WARS2Q9UGM6 360 aaKnown RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 PACSIN3Q9UKS6 424 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 PAPPA2Q9BXP8 1791 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SLC15A5A6NIM6 579 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TRPC5OSA6NMA1 111 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 M0R3G1 203 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 NRG2O14511 850 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TPP1O14773 563 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 HAT1O14929 419 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 RAD51BO15315 384 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TRIM13O60858 407 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 CCNKO75909 580 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 GPIP06744 558 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TPSB2P20231 275 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 MMP8P22894 467 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SLC26A2P50443 739 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 RPL14P50914 215 aaKnown RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 DEFA1P59665 94 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 DEFA3P59666 94 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 DYNLT1P63172 113 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 BNC1Q01954 994 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TNFAIP2Q03169 654 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 EPS8Q12929 822 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 PDK2Q15119 407 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TPSAB1Q15661 275 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SLC9A4Q6AI14 798 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 GTF2IRD2BQ6EKJ0 949 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 FAM45BPQ6NSW5 357 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 ZCCHC8Q6NZY4 707 aaKnown RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SYCE2Q6PIF2 218 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 UBE2Q1Q7Z7E8 422 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 DSG4Q86SJ6 1040 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 GTF2IRD2Q86UP8 949 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 RFX6Q8HWS3 928 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 UNC45BQ8IWX7 931 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 ELMOD2Q8IZ81 293 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 CLIP4Q8N3C7 705 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 RNF148Q8N7C7 305 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 OR7A2PQ8NGA2 310 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 FAM45AQ8TCE6 357 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 LPGAT1Q92604 370 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 HDAC11Q96DB2 347 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 RTP4Q96DX8 246 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 MASTLQ96GX5 879 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SPATA17Q96L03 361 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 CEP170P1Q96L14 293 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 CPXM1Q96SM3 734 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 MMP19Q99542 508 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms