RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SSBP2P81877 361 aaPredicted RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 GHRHRQ02643 423 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 GOLGA8FQ08AF8 430 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 STIM1Q13586 685 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 BAK1Q16611 211 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 SLC9C1Q4G0N8 1177 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 FAM57BQ71RH2 274 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 RNF144BQ7Z419 303 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 KLBQ86Z14 1044 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 BRSK2Q8IWQ3 736 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 PAF1Q8N7H5 531 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 TSPYL6Q8N831 410 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 IP6K1Q92551 441 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 HVCN1Q96D96 273 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 FRG2BQ96QU4 278 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 SIGLEC11Q96RL6 698 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CRAMP1Q96RY5 1269 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 FUZQ9BT04 418 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CADM1Q9BY67 442 aaKnown RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 CTDSP1Q9GZU7 261 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 UNC45AQ9H3U1 944 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 PAPOLBQ9NRJ5 636 aaKnown RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 PTGFRNQ9P2B2 879 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 HDAC6Q9UBN7 1215 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 IPO11Q9UI26 975 aaKnown RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 TUBGCP6Q96RT7 1819 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CKAP5Q14008 2032 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CHD8Q9HCK8 2581 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 BRD4O60885 1362 aaPredicted RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 FMN2Q9NZ56 1722 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 TECPR2O15040 1411 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 GOLGA6L10A0A0M3HER8 536 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 A6NLC8 198 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 J3KRW8 73 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 TLR2O60603 784 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 GUCY1B2O75343 617 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 NEURL1O76050 574 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 HNRNPA1P09651 372 aaKnown RBP eCLIP3.64□□□□□ -1.83
SRP54-209ENST00000555746 IFIT1P09914 478 aaKnown RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 WEE2P0C1S8 567 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 CD53P19397 219 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 DDIT3P35638 169 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 PGM1P36871 562 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 LIFRP42702 1097 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 GPD2P43304 727 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 DEFB115Q30KQ5 88 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 ARL13AQ5H913 290 aaPredicted RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 SH2D4BQ5SQS7 431 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 ISM2Q6H9L7 571 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 SLC18B1Q6NT16 456 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 LRIG3Q6UXM1 1119 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 SRRM1Q8IYB3 904 aaKnown RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 TEX19Q8NA77 164 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 SETD9Q8NE22 299 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 ST8SIA4Q92187 359 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 STAMQ92783 540 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 KAT2AQ92830 837 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 SEC62Q99442 399 aaKnown RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 CD180Q99467 661 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 CLSTN3Q9BQT9 956 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 SH2D3AQ9BRG2 576 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 NPLQ9BXD5 320 aaPredicted RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 QTRT1Q9BXR0 403 aaKnown RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 AGXT2Q9BYV1 514 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 PRSS22Q9GZN4 317 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 MAF1Q9H063 256 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 JMJD4Q9H9V9 463 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 UPB1Q9UBR1 384 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 FBXO4Q9UKT5 387 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 AGO2Q9UKV8 859 aaKnown RBP3.64□□□□□ -1.83
SRP54-209ENST00000555746 HSF4Q9ULV5 492 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 FRMD4BQ9Y2L6 1034 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 ATP7BP35670 1465 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 LMTK2Q8IWU2 1503 aa3.64□□□□□ -1.83
SRP54-209ENST00000555746 THSD7BQ9C0I4 1608 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 EIF2AK4Q9P2K8 1649 aaKnown RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 CCDC144AA2RUR9 1427 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TNS3Q68CZ2 1445 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 MUC3AQ02505 3323 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TRBV5-3A0A0A0MS03 114 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 KIR2DS5A0A0G2JLQ3 304 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 TCRBV7S3A2A0A539 114 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CXorf65A6NEN9 183 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 GAGE10A6NGK3 116 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 F8W810 466 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 KIR2DS3K7RE56 304 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 PRPF4O43172 522 aaKnown RBP eCLIP3.63□□□□□ -1.83
SRP54-209ENST00000555746 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 NFATC1O95644 943 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CHRM4P08173 479 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CHRNA5P30532 468 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 NR1H2P55055 460 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ID2Q02363 134 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 GALNT3Q14435 633 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 SUPT20HL1Q3ZLR7 823 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 C5orf22Q49AR2 442 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 MIDNQ504T8 468 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 FAM171A1Q5VUB5 890 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CYB5R4Q7L1T6 521 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms